iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114087

Ensembl Protein ID

Sb03g027000.1

UniProt Accession

C5XQ78; C5XQ78_SORBI

Genbank Protein ID

EES01019.1

Protein Name

Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G209200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g027000	Sb03g027000.1	Sb03g027000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-11	44.2	286	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           + +t+ +f  +  ++l+ +s  g+i++ Dlr+
   Q: 286  EVITSAEFhpTHcNTLAYSSSKGSIRLVDLRQ 317
           6799*9***633799999***********997 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MNGAAAPERS PSASPPLPAQ AQAQAPPSPS PTQPLEWRFS QVFGERSAGE EVQDVDIISA 60
IEFNKSGHHL ATGDRGGRVV LFERTDVKDH ACRKDAEKAD YSISRHPEFR YKTEFQSHEP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACGGCG CTGCGGCACC GGAGCGCTCG CCCTCAGCCT CGCCCCCGCT TCCGGCCCAG 60
GCGCAGGCAC AGGCGCCGCC CTCGCCCTCT CCGACGCAGC CGCTCGAGTG GAGGTTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR000009--PP2A_PR55
IPR018067--PP2A_PR55_CS
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS01024--PR55_1
PS01025--PR55_2
PS00678--WD_REPEATS_1

Pfam

PF00400--WD40

PRINTS

PR00600--PP2APR55

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0000159--C:protein phosphatase type 2A complex
GO:0019888--F:protein phosphatase regulator activity
GO:0032502--P:developmental process
GO:0000278--P:mitotic cell cycle
GO:0070262--P:peptidyl-serine dephosphorylation

KEGG

sbi:SORBI_03g027000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001169	Aegilops tauschii	85.93	0.00e+00	791.00
IUUC-Bdi-014767	Brachypodium distachyon	83.91	0.00e+00	800.00
IUUC-Cel-018618	Caenorhabditis elegans	50.21	3.00e-130	457.00
IUUC-Cin-025380	Ciona intestinalis	50.31	8.00e-124	436.00
IUUC-Csv-026097	Ciona savignyi	51.15	8.00e-125	439.00
IUUC-Ete-032410	Echinops telfairi	40.17	2.00e-82	298.00
IUUC-Hvu-047813	Hordeum vulgare	89.67	0.00e+00	854.00
IUUC-Lpe-050866	Leersia perrieri	90.85	0.00e+00	877.00
IUUC-Meu-056450	Macropus eugenii	46.30	1.00e-108	385.00
IUUC-Mga-059946	Meleagris gallopavo	51.04	9.00e-122	429.00
IUUC-Oba-075019	Oryza barthii	91.68	0.00e+00	882.00
IUUC-Obr-076686	Oryza brachyantha	89.23	0.00e+00	879.00
IUUC-Ogu-078671	Oryza glumaepatula	91.48	0.00e+00	880.00
IUUC-Oin-079193	Oryza indica	91.27	0.00e+00	879.00
IUUC-Olo-080800	Oryza longistaminata	91.14	0.00e+00	841.00
IUUC-Ome-081334	Oryza meridionalis	91.48	0.00e+00	880.00
IUUC-Oni-082390	Oryza nivara	84.62	0.00e+00	796.00
IUUC-Opu-084074	Oryza punctata	91.12	0.00e+00	854.00
IUUC-Osa-085954	Oryza sativa	91.27	0.00e+00	879.00
IUUC-Olu-087882	Ostreococcus lucimarinus	55.60	7.00e-149	519.00
IUUC-Sit-110793	Setaria italica	97.30	0.00e+00	911.00
IUUC-Tae-125241	Triticum aestivum	89.46	0.00e+00	840.00
IUUC-Tur-126274	Triticum urartu	86.98	0.00e+00	792.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence