iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d011705	Zm00001d011705_T003	Zm00001d011705_T003
Zm00001d011705	Zm00001d011705_T009	Zm00001d011705_T009
Zm00001d011705	Zm00001d011705_T004	Zm00001d011705_T004
Zm00001d011705	Zm00001d011705_T007	Zm00001d011705_T007
Zm00001d011705	Zm00001d011705_T006	Zm00001d011705_T006
Zm00001d011705	Zm00001d011705_T002	Zm00001d011705_T002
Zm00001d011705	Zm00001d011705_T005	Zm00001d011705_T005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-23	84.3	313	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+++v+c+++   d +++++Gs D+++++WD
   Q: 313  HSGDVHCVDWnpLDvNYILTGSADNSVRMWD 343
           ************888**************** PP

Organism

Zea mays

Protein Sequence
(Fasta)

MKERSGSRAA VDERYAQWKS LIPVLYDWFA NHNLVWPSLS CRKMPCSLHH VTLQLMMLIS 60
GCLLTGGGHS LRKLPTRIVS ACTYLNRQVH LQTDGSVPNT LVIANCEVVK PRVAAAEHIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGAGGCCC CGCTCCTCTC CCTGCTCGCT GCACAGGGAC TCGGCCTCCG GGACGGCAGA 60
CCCACAAGCG CCAGCACGCT CGAGACTGTG CCGTGGGAGT GGGAGGTTCC TCAGGTGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	83.26	0.00e+00	697.00
IUUC-Hvu-047149	Hordeum vulgare	72.63	1.00e-60	224.00
IUUC-Lpe-051595	Leersia perrieri	72.78	0.00e+00	697.00
IUUC-Mac-065523	Musa acuminata	74.09	7.00e-175	605.00
IUUC-Oba-075959	Oryza barthii	70.75	0.00e+00	664.00
IUUC-Ogu-078314	Oryza glumaepatula	67.17	8.00e-176	609.00
IUUC-Oni-082416	Oryza nivara	71.32	0.00e+00	676.00
IUUC-Opu-083571	Oryza punctata	68.87	0.00e+00	638.00
IUUC-Oru-084902	Oryza rufipogon	74.53	0.00e+00	713.00
IUUC-Ppa-095350	Physcomitrella patens	54.47	4.00e-154	537.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence