iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080713

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539628.1_FG009	KN539628.1_FGT009	KN539628.1_FGP009

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.70e-32	108.7	110	148
UBD/Beta-Prp	7.30e-50	170.4	20	223

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH + ++ ++f +d + +v+G+ D+ +kvWDl+ g+ll+
   Q: 110  GHRGAIRTIRFtPDgRWVVTGGEDNIVKVWDLTAGKLLH 148
           8***********99999******************9986 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           +++slsgh++ v av+f+  + + + gs+ + ik+wdl+  k v++l+gh +s +s++f+p g++++sGs+d  +++wd++++ c++ t +g
   Q: 20   FVQSLSGHTGSVEAVEFDTAEVLVLAGSSNGSIKLWDLEEAKVVRSLTGHRSSCTSVEFHPFGEFFASGSSDTDLKIWDIKKKGCIH-TYKG 110
           689******************99****************************************************************.**** PP
   S: 136  hdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks 227
           h+g+++++++ pdg+ +v+G+ D++v++Wdl  gkll++++  h +++++++f+++ + l++gs d+tvk+wdl+t e + +     + v+s
   Q: 111  HRGAIRTIRFTPDGRWVVTGGEDNIVKVWDLTAGKLLHDFKF-HSGQIRCIDFHPQEFLLATGSADRTVKFWDLETFELIGSAGPEATGVRS 201
           *****************************************9.************************************************* PP
   S: 228  vrfspnderlvsgssDgsiriWd 250
             f+p+++ l +g  D+s++++ 
   Q: 202  TVFHPDGKTLFCG-LDQSLKVFS 223
           **********999.699999953 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MDTSIGYVEF DSCRVSGLLF VQSLSGHTGS VEAVEFDTAE VLVLAGSSNG SIKLWDLEEA 60
KVVRSLTGHR SSCTSVEFHP FGEFFASGSS DTDLKIWDIK KKGCIHTYKG HRGAIRTIRF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACACTT CTATTGGTTA TGTTGAATTT GACTCATGCC GTGTTTCTGG CTTATTGTTT 60
GTGCAGAGCT TATCAGGCCA CACTGGCTCA GTTGAGGCTG TTGAGTTTGA TACAGCAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000869	Aegilops tauschii	70.43	0.00e+00	1024.00
IUUC-Bdi-014531	Brachypodium distachyon	78.29	0.00e+00	1191.00
IUUC-Cme-027305	Cyanidioschyzon merolae	31.60	1.00e-22	101.00
IUUC-Eeu-034607	Erinaceus europaeus	31.75	3.00e-29	121.00
IUUC-Gma-043341	Glycine max	43.35	4.00e-173	600.00
IUUC-Hvu-047729	Hordeum vulgare	75.93	0.00e+00	853.00
IUUC-Mac-065245	Musa acuminata	54.49	1.00e-160	559.00
IUUC-Oba-075016	Oryza barthii	88.27	0.00e+00	1882.00
IUUC-Obr-076138	Oryza brachyantha	90.20	0.00e+00	1382.00
IUUC-Ogl-077401	Oryza glaberrima	97.88	0.00e+00	1464.00
IUUC-Ogu-078062	Oryza glumaepatula	98.11	0.00e+00	1435.00
IUUC-Oin-080042	Oryza indica	97.84	0.00e+00	1433.00
IUUC-Ome-081192	Oryza meridionalis	98.99	0.00e+00	1355.00
IUUC-Oni-082473	Oryza nivara	97.84	0.00e+00	1426.00
IUUC-Opu-083293	Oryza punctata	88.78	0.00e+00	1295.00
IUUC-Oru-085183	Oryza rufipogon	97.70	0.00e+00	1432.00
IUUC-Osa-085801	Oryza sativa	97.75	0.00e+00	1463.00
IUUC-Sit-110364	Setaria italica	78.50	0.00e+00	1139.00
IUUC-Sbi-114389	Sorghum bicolor	69.63	0.00e+00	1030.00
IUUC-Tae-125511	Triticum aestivum	77.11	0.00e+00	1145.00
IUUC-Tur-126181	Triticum urartu	73.67	0.00e+00	1096.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence