iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058653

Ensembl Protein ID

KEH41612

UniProt Accession

A0A072VIF9; A0A072VIF9_MEDTR

Genbank Protein ID

KEH41612.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g059090

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g059090	AES60617	AES60617
MTR_1g059090	KEH41612	KEH41612

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-13	52.2	283	318

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf........sdtl..lvsGsdDgtikvW 28
           H++++t +++        + +   lv+Gs Dg++kvW
   Q: 283  HNSWITTMSWllfafdslN-PQiiLVTGSSDGSVKVW 318
           ************9986642.33457************ PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGSQPSPLQP AMLMGSPSFP NALAWSHDNL IAAASGHFVT ILRPDLPNGP RGLIKVIPNE 60
PLILGFIDRK DLHSGCLLPT ALYRDDKPVV RSISWSPLGM APNSGCLIAV CTSDGHVKVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACAGATTCG AACCCTCATC TTCTACTTCC ATCATCTCAT CTTTCTTTGA ACAGTTACCG 60
CTACGCTACA GAAGATGGGC AGTCAACCGA GTCCGTTACA GCCAGCTATG TTAATGGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024761--TFIIIC_delta_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12657--TFIIIC_delta
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014902	Brachypodium distachyon	37.61	2.00e-153	536.00
IUUC-Mac-065235	Musa acuminata	36.58	7.00e-109	387.00
IUUC-Ogl-077286	Oryza glaberrima	33.83	1.00e-100	360.00
IUUC-Oin-079863	Oryza indica	33.98	3.00e-100	359.00
IUUC-Oru-084242	Oryza rufipogon	32.03	6.00e-90	325.00
IUUC-Osa-085660	Oryza sativa	33.83	3.00e-100	359.00
IUUC-Ppe-101763	Prunus persica	54.49	0.00e+00	845.00
IUUC-Sit-110507	Setaria italica	37.69	4.00e-154	538.00
IUUC-Sly-111401	Solanum lycopersicum	45.72	4.00e-143	501.00
IUUC-Stu-112879	Solanum tuberosum	47.60	6.00e-111	394.00
IUUC-Tca-121440	Theobroma cacao	49.40	0.00e+00	800.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence