iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114729

UUCD1 version

UUC-SoB-00048

Ensembl Protein ID

Sb01g003740.1

UniProt Accession

A0A1B6QH78; A0A1B6QH78_SORBI

Genbank Protein ID

KXG37275.1; KXG37276.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760; CM000760

Gene Name

SORBI_001G040500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g003740	Sb01g003740.1	Sb01g003740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-06	28.4	266	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cledf     + + +pC+H fh +C+  w         + +CP+Cr
   Q: 266  CSVCLEDFemgA-EAKQMPCQHKFHSHCILPW------LELHSSCPICR 307
           ********7743.3899***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDEGQGVRYW CHRCEEVIDP MPEMKCPSCD GGFVEEMGSE DFEAATNARS DRSLSLLAPL 60
LFGMLGGSSR RSRLRREAMA DDDADEDDEE DDSDHELEAS SRRRRRRGSS ALLRMLQTIR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCCCCTG CCCAGTGTGC GCACTCCCTC CCTCCCTCTC TCTCGGTTTC TCCCTCTTGG 60
CGACGACTGG GCGGCCGACA GGCCGTCGCC GCCGCCCTAC GCCAGGTTCC GAGGTCTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001123	Aegilops tauschii	69.11	3.00e-72	264.00
IUUC-Atr-003093	Amborella trichopoda	62.50	9.00e-50	189.00
IUUC-Aly-006367	Arabidopsis lyrata	54.39	3.00e-46	178.00
IUUC-Bdi-014762	Brachypodium distachyon	76.12	1.00e-69	256.00
IUUC-Bra-017167	Brassica rapa	55.94	2.00e-43	168.00
IUUC-Cin-025452	Ciona intestinalis	38.64	9.00e-20	88.20
IUUC-Gma-044146	Glycine max	65.65	2.00e-47	182.00
IUUC-Hvu-047357	Hordeum vulgare	49.51	2.00e-40	158.00
IUUC-Lpe-051411	Leersia perrieri	76.44	8.00e-73	266.00
IUUC-Mtr-058295	Medicago truncatula	63.16	5.00e-47	180.00
IUUC-Mac-064948	Musa acuminata	63.85	4.00e-37	147.00
IUUC-Oba-075441	Oryza barthii	84.05	4.00e-71	260.00
IUUC-Obr-076715	Oryza brachyantha	84.00	5.00e-83	300.00
IUUC-Ogl-077359	Oryza glaberrima	84.05	4.00e-71	260.00
IUUC-Ogu-078243	Oryza glumaepatula	83.44	1.00e-70	259.00
IUUC-Oin-079349	Oryza indica	83.44	2.00e-70	258.00
IUUC-Olo-080400	Oryza longistaminata	84.43	4.00e-73	266.00
IUUC-Ome-081311	Oryza meridionalis	84.66	2.00e-78	285.00
IUUC-Oni-082403	Oryza nivara	84.05	8.00e-71	259.00
IUUC-Opu-084151	Oryza punctata	50.24	2.00e-41	162.00
IUUC-Oru-085092	Oryza rufipogon	84.05	5.00e-71	260.00
IUUC-Osa-085947	Oryza sativa	83.44	2.00e-70	258.00
IUUC-Pop-099555	Populus trichocarpa	64.39	9.00e-49	186.00
IUUC-Ppe-101941	Prunus persica	66.92	1.00e-48	186.00
IUUC-Pte-104044	Pyrenophora teres	42.47	8.00e-14	71.20
IUUC-Pyt-104819	Pyrenophora triticirepentis	39.47	1.00e-13	70.50
IUUC-Sly-110912	Solanum lycopersicum	52.22	3.00e-49	187.00
IUUC-Stu-112771	Solanum tuberosum	45.13	4.00e-58	217.00
IUUC-Tca-121112	Theobroma cacao	62.41	6.00e-44	170.00
IUUC-Tur-126272	Triticum urartu	71.90	4.00e-83	300.00
IUUC-Vvi-131512	Vitis vinifera	65.41	9.00e-50	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence