iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114337

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G189800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g023730	Sb02g023730.1	Sb02g023730.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-10	42.2	122	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg.........plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +++d          ++vlp CgH fha C+++w        ++++CP+Cr
   Q: 122  CAICLAELDDDlegggervrVRVLPaCGHGFHAACVEAW------LATRASCPTCR 171
           ********66444445555599999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MALANRTSSH TASTPPSPAG AGPPPRPVDQ WGPNSSCRAC LSDLAAVVVV LVCFSCVALC 60
LHYAAGVLLR CLHRHRRRRR RRRAAREEAQ AQAQEPKPLS DADGGSAGAS PVVAGVWAEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCTAG CGAACCGGAC CAGCAGCCAC ACCGCCTCCA CACCGCCGTC ACCCGCGGGC 60
GCGGGGCCTC CGCCGCGTCC CGTCGACCAG TGGGGCCCCA ACTCCAGCTG CCGCGCCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g023730

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014470	Brachypodium distachyon	70.77	9.00e-20	89.00
IUUC-Lpe-051228	Leersia perrieri	71.67	3.00e-15	73.90
IUUC-Oin-079938	Oryza indica	79.63	3.00e-18	84.00
IUUC-Ome-082011	Oryza meridionalis	75.00	2.00e-16	77.80
IUUC-Oni-082222	Oryza nivara	79.63	3.00e-18	84.00
IUUC-Opu-083539	Oryza punctata	76.92	3.00e-16	77.00
IUUC-Oru-084511	Oryza rufipogon	79.63	5.00e-18	83.20
IUUC-Osa-085552	Oryza sativa	79.63	5.00e-18	83.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence