iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d017514	Zm00001d017514_T001	Zm00001d017514_T001
Zm00001d017514	Zm00001d017514_T002	Zm00001d017514_T002
Zm00001d017514	Zm00001d017514_T006	Zm00001d017514_T006
Zm00001d017514	Zm00001d017514_T003	Zm00001d017514_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-06	29.4	2570	2603

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH ++vtcla+  d  +lv+Gs+D t+ +W++r+
   Q: 2570 GHLAPVTCLALsADsSYLVTGSRDTTVILWRIRQ 2603
           8***********5559***************875 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MGEEDTGEMP DASPPAPWEH GVDERFADES LGLFDDEAYT VEEEDVSDTE MTAGSPAAPS 60
EPSPPLRRRL APVVPSDVPE QVVRAVDAVI MGGGVERLRD MVSEENGEVS HFIVDVLMVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACCGCG CCACCACCGT TAATCTTGGA CTAGCATTTC CCCCAAACAC CGACCGTTTC 60
TCCCCGGCCT CATACCCAAA TCGCAAATTT TTTGATCAAG AGATTCGCAT AATTTTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Oba-075819	Oryza barthii	74.58	0.00e+00	3757.00
IUUC-Obr-076035	Oryza brachyantha	71.81	0.00e+00	3654.00
IUUC-Ogl-077738	Oryza glaberrima	72.60	0.00e+00	3684.00
IUUC-Ogu-077967	Oryza glumaepatula	73.39	0.00e+00	3789.00
IUUC-Oin-079420	Oryza indica	72.26	0.00e+00	3669.00
IUUC-Olo-081040	Oryza longistaminata	71.68	0.00e+00	3629.00
IUUC-Ome-081352	Oryza meridionalis	71.89	0.00e+00	3601.00
IUUC-Oni-082483	Oryza nivara	73.73	0.00e+00	3782.00
IUUC-Opu-083783	Oryza punctata	72.58	0.00e+00	3697.00
IUUC-Oru-085097	Oryza rufipogon	71.88	0.00e+00	3640.00
IUUC-Osa-085661	Oryza sativa	72.72	0.00e+00	2788.00
IUUC-Sit-110396	Setaria italica	84.30	0.00e+00	4311.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence