iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d017686	Zm00001d017686_T004	Zm00001d017686_T004
Zm00001d017686	Zm00001d017686_T002	Zm00001d017686_T002
Zm00001d017686	Zm00001d017686_T001	Zm00001d017686_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.60e-78	264.5	203	509

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqq 90
           Gl+N+gNtC++N++LQc++++ +l   l +  +   ++   ++e+  +  ++l++ + e   ++ ++++p+++ ++l+k++  f+  +q+
   Q: 203  GLSNMGNTCFLNATLQCITHTVPLFLKLCSnDHFTPCS---YNEDGFCSFCALKEHVDESIRRSGSVIAPTKFRDSLRKLSLDFTPGQQE 289
           9*******************988888877723333444...45889999***************************************** PP
   S: 91   DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgke 180
           Da+Efl++lld+l+e            +        ++++++    +++s+++++F+gqlks++ c ec+++s+++epfldlsl++ + +
   Q: 290  DAHEFLRCLLDNLHECT----------L-------DPKSKSKGSSFEEESIVKEIFGGQLKSHLSCCECGHSSETFEPFLDLSLEIDQVD 362
           ***************99..........1.......12334455566788***************************************** PP
   S: 181  etkkeslqdcLesftkeeeleg.enkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspe 269
                 l d+L+sftk e++ + enk+ ce+c++++  +k+l+l + P+v+ +hLkRf+     +s +ki+k+v +ple+dl+pf ++pe
   Q: 363  -----HLVDALQSFTKVEQVGDsENKLTCESCNARVCKNKQLTLYRAPDVIAFHLKRFT--TLDNSVKKIDKYVAYPLEVDLKPFHSNPE 445
           .....89*************752788********************************4..4457889********************99 PP
   S: 270  ekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkrr 338
           +    + kY+L++vv HsG ++ GHYv+ ++++   W+l++Ds+V +++ ++ l+   ++aY+lfY r+
   Q: 446  TVG--ELKYDLYGVVEHSGLPNYGHYVCTIRSSPSTWYLMNDSNVDSITDSSALN---QEAYILFYVRQ 509
           988..9*************************************************...********875 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MTPRPHQPAG HLLRGRETLT GARIPLYSMA EQDGDAGQMP PDSVPVVGVG DQNTNQHQPF 60
FSMCQPLRTV SYSNSWDGTC VAAANENDHT GISGTLDRED DSCSRHSINK EVSLVQGVMK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGCGTCAT CAGTTAACCA AGACGCGCAG CTCCCGCCTC CGTTTCAAAC CCGAAATTTT 60
CCGCCGTCCC CCAAATTCTT TCCCTCGCCT TGCATCCGCT CAACCAACAA AATCGCCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000766	Aegilops tauschii	54.80	0.00e+00	643.00
IUUC-Cin-025797	Ciona intestinalis	33.14	6.00e-44	170.00
IUUC-Hvu-047714	Hordeum vulgare	55.83	0.00e+00	696.00
IUUC-Lpe-051429	Leersia perrieri	62.21	3.00e-148	518.00
IUUC-Oba-075717	Oryza barthii	55.83	0.00e+00	667.00
IUUC-Obr-076777	Oryza brachyantha	56.52	2.00e-84	305.00
IUUC-Ogu-078191	Oryza glumaepatula	55.62	0.00e+00	653.00
IUUC-Oin-079634	Oryza indica	55.76	0.00e+00	653.00
IUUC-Olo-081005	Oryza longistaminata	46.86	1.00e-68	253.00
IUUC-Oni-082505	Oryza nivara	56.63	0.00e+00	669.00
IUUC-Opu-083445	Oryza punctata	61.59	2.00e-144	505.00
IUUC-Sit-110230	Setaria italica	60.60	0.00e+00	808.00
IUUC-Sbi-114120	Sorghum bicolor	67.28	0.00e+00	899.00
IUUC-Tae-125005	Triticum aestivum	57.10	0.00e+00	702.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence