iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135126

UUCD1 version

UUC-ZeM-01418

Ensembl Protein ID

Zm00001d017923_T001

UniProt Accession

A0A1D6HJ52; A0A1D6HJ52_MAIZE

Genbank Protein ID

AQK74515.1

Protein Name

RING-H2 finger protein ATL56

Genbank Nucleotide ID

CM000781

Gene Name

ZEAMMB73_Zm00001d017923

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d017923	Zm00001d017923_T001	Zm00001d017923_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-07	33.7	74	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle f   ++  +vlp C H fha+C+ +w       +k+  CP+Cr
   Q: 74   CAVCLEAFqagDR-CRVLPrCDHGFHAQCVDQW------LRKSRVCPVCR 116
           ********88655.889999*************......**********8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MVELTVSVLL LVAGVVAMLV LHILIVVWAL RRGVVLRAAA SRQDEERAEG LSAEDLNELP 60
CHAHECKAGA GAECAVCLEA FQAGDRCRVL PRCDHGFHAQ CVDQWLRKSR VCPVCRAEVG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGGAAC TGACGGTGTC CGTGCTCCTC CTGGTCGCCG GCGTCGTGGC GATGCTGGTG 60
CTCCACATCC TCATCGTCGT CTGGGCGCTC CGGCGGGGCG TCGTCCTCCG CGCAGCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000931	Aegilops tauschii	58.41	8.00e-26	108.00
IUUC-Atr-002505	Amborella trichopoda	48.39	4.00e-19	86.70
IUUC-Bdi-014085	Brachypodium distachyon	61.62	6.00e-21	92.80
IUUC-Hvu-047516	Hordeum vulgare	62.70	3.00e-33	133.00
IUUC-Lpe-050695	Leersia perrieri	57.14	2.00e-29	122.00
IUUC-Oba-075253	Oryza barthii	58.33	4.00e-28	117.00
IUUC-Obr-076685	Oryza brachyantha	74.24	5.00e-23	99.40
IUUC-Ogl-077645	Oryza glaberrima	71.25	9.00e-27	111.00
IUUC-Ogu-078833	Oryza glumaepatula	64.95	2.00e-29	122.00
IUUC-Oin-079853	Oryza indica	71.25	9.00e-27	111.00
IUUC-Oni-082095	Oryza nivara	60.82	3.00e-26	112.00
IUUC-Opu-084075	Oryza punctata	67.90	3.00e-27	113.00
IUUC-Oru-085007	Oryza rufipogon	63.92	8.00e-29	120.00
IUUC-Osa-085825	Oryza sativa	70.37	1.00e-26	112.00
IUUC-Sit-109686	Setaria italica	77.27	1.00e-28	118.00
IUUC-Sly-111913	Solanum lycopersicum	37.50	3.00e-27	113.00
IUUC-Stu-112550	Solanum tuberosum	37.30	3.00e-26	110.00
IUUC-Sbi-114425	Sorghum bicolor	69.41	3.00e-25	107.00
IUUC-Tni-120282	Tetraodon nigroviridis	40.24	5.00e-15	75.10
IUUC-Tca-121009	Theobroma cacao	41.18	4.00e-24	105.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence