iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135036

UUCD1 version

UUC-ZeM-00667

Ensembl Protein ID

Zm00001d017976_T001

UniProt Accession

A0A1D6HJN5; A0A1D6HJN5_MAIZE

Genbank Protein ID

AQK74678.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000781

Gene Name

ZEAMMB73_Zm00001d017976

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d017976	Zm00001d017976_T001	Zm00001d017976_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-31	109.9	42	113

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p+ flCpIsle+M+dPv++ +Gitydr s+e wl++g++tcPvt +pl+ edl+Pn++ rr+iq+wc +n+
   Q: 42   IPSNFLCPISLEMMKDPVTALTGITYDRDSVEGWLQRGHSTCPVTARPLRAEDLIPNHATRRMIQDWCVANR 113
           89******************************************************************9986 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MVTPAVSRYR LRPRLVRVAV SEIPLATRRT RQQPVAATEP AIPSNFLCPI SLEMMKDPVT 60
ALTGITYDRD SVEGWLQRGH STCPVTARPL RAEDLIPNHA TRRMIQDWCV ANRALGVERV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTACGC CGGCGGTGTC CCGCTACCGG CTTCGCCCGC GGTTGGTGCG TGTGGCGGTG 60
TCAGAGATCC CGCTCGCCAC GAGGCGGACG AGGCAGCAGC CCGTGGCCGC GACGGAGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000169	Aegilops tauschii	73.28	4.00e-92	330.00
IUUC-Aly-006171	Arabidopsis lyrata	40.29	6.00e-75	274.00
IUUC-Ath-007692	Arabidopsis thaliana	39.85	3.00e-70	258.00
IUUC-Bol-015846	Brassica oleracea	38.01	1.00e-72	266.00
IUUC-Bra-017285	Brassica rapa	40.43	6.00e-73	267.00
IUUC-Gma-043443	Glycine max	45.58	9.00e-80	290.00
IUUC-Hvu-047616	Hordeum vulgare	72.64	7.00e-158	549.00
IUUC-Lpe-050701	Leersia perrieri	63.23	3.00e-119	421.00
IUUC-Mac-065453	Musa acuminata	47.60	3.00e-96	344.00
IUUC-Oba-075080	Oryza barthii	73.33	2.00e-84	305.00
IUUC-Obr-076534	Oryza brachyantha	68.18	3.00e-139	487.00
IUUC-Ogl-077723	Oryza glaberrima	70.94	1.00e-132	466.00
IUUC-Ogu-078447	Oryza glumaepatula	70.43	5.00e-133	467.00
IUUC-Oin-079382	Oryza indica	67.62	8.00e-115	406.00
IUUC-Ome-081665	Oryza meridionalis	72.33	1.00e-138	485.00
IUUC-Oni-082092	Oryza nivara	70.94	1.00e-132	466.00
IUUC-Opu-083482	Oryza punctata	71.17	1.00e-147	515.00
IUUC-Oru-084868	Oryza rufipogon	70.94	1.00e-132	466.00
IUUC-Osa-085472	Oryza sativa	70.94	1.00e-132	466.00
IUUC-Ppa-095941	Physcomitrella patens	38.42	9.00e-60	223.00
IUUC-Smo-108988	Selaginella moellendorffii	37.05	4.00e-57	214.00
IUUC-Sit-109812	Setaria italica	82.45	2.00e-172	598.00
IUUC-Sly-111577	Solanum lycopersicum	46.39	1.00e-97	349.00
IUUC-Sbi-114336	Sorghum bicolor	85.19	5.00e-166	576.00
IUUC-Tca-121201	Theobroma cacao	46.90	1.00e-98	352.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence