iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135766

Ensembl Protein ID

Zm00001d018460_T003

UniProt Accession

F1DJZ8; F1DJZ8_MAIZE

Genbank Protein ID

ADX60168.1; AQK76064.1

Protein Name

LUG transcription factor; Leunig-related2

Genbank Nucleotide ID

HQ858756; CM000781

Gene Name

ZEAMMB73_Zm00001d018460

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d018460	Zm00001d018460_T011	Zm00001d018460_T011
Zm00001d018460	Zm00001d018460_T008	Zm00001d018460_T008
Zm00001d018460	Zm00001d018460_T003	Zm00001d018460_T003
Zm00001d018460	Zm00001d018460_T004	Zm00001d018460_T004
Zm00001d018460	Zm00001d018460_T001	Zm00001d018460_T001
Zm00001d018460	Zm00001d018460_T005	Zm00001d018460_T005
Zm00001d018460	Zm00001d018460_T009	Zm00001d018460_T009
Zm00001d018460	Zm00001d018460_T012	Zm00001d018460_T012
Zm00001d018460	Zm00001d018460_T002	Zm00001d018460_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-27	94.0	605	644
UBD/Beta-Prp	7.20e-45	155.4	515	678

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllk 37
           gH++ vt+l+f    ++ll+s+ + g i+ W+++++ +l+
   Q: 605  GHNGQVTSLDFhpkKTDLLCSCDGSGEIRYWNVTQFACLR 644
           8***********7533999****************99987 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtl 175
           v  ++  ++++++++fs +g+ l+s++h + + +w++e+ q  + t ++h  +++ v++ p+++ l+++s Drt++lW+    g+ l+t+
   Q: 515  VNCWRTSNSKIVCCHFSSDGKILASAGHEKKAVLWNMENFQTQY-TPEEHALIITDVRFRPNSSQLATSSFDRTIKLWNAaDPGFSLHTF 603
           55677889************************************.**********************************96779****** PP
   S: 176  tgghtdsvyslsfdsngke.lvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrs 253
           tg h+++v+sl+f++++++ l s++  g +++w++ +  c+r+ +g +++v+   f p+   ++ ++++++++i+d+++
   Q: 604  TG-HNGQVTSLDFHPKKTDlLCSCDGSGEIRYWNVTQFACLRAIKGGSAQVR---FQPHVGQFLAAAAENVVSIFDIET 678
           *9.*************96615699999*******************999876...8888888888999********987 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAQSNWEADK MLDVYIYDYL LKRNLQTTAK AFMTEGKVAA DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAAAYLE AQQIKAREHQ QQMQMQQLQL MHQRHAQLQR TNANHPSLNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCCTACCGA GCCGAGTCGA CCCATGCCTC TTCTCCTTCA CTCTCTGCTA TGCTATGCTT 60
ACCCCGTTCT CTCTCTCCTC CCTTTCTTTC TCATCTACTA CTACTAGACT ACTAGTAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00320--WD40

KEGG

zma:100285175

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000776	Aegilops tauschii	82.70	0.00e+00	688.00
IUUC-Atr-002717	Amborella trichopoda	67.72	2.00e-159	555.00
IUUC-Aly-006471	Arabidopsis lyrata	63.46	0.00e+00	897.00
IUUC-Ath-007671	Arabidopsis thaliana	62.20	0.00e+00	900.00
IUUC-Bdi-014855	Brachypodium distachyon	86.77	0.00e+00	1310.00
IUUC-Bol-016419	Brassica oleracea	59.75	0.00e+00	894.00
IUUC-Bra-017537	Brassica rapa	59.10	0.00e+00	875.00
IUUC-Gma-044008	Glycine max	65.68	0.00e+00	968.00
IUUC-Hvu-047358	Hordeum vulgare	83.66	0.00e+00	727.00
IUUC-Lpe-051527	Leersia perrieri	85.23	0.00e+00	1270.00
IUUC-Mtr-058582	Medicago truncatula	64.93	0.00e+00	957.00
IUUC-Mac-064608	Musa acuminata	74.38	0.00e+00	1083.00
IUUC-Oba-075243	Oryza barthii	81.65	0.00e+00	1259.00
IUUC-Obr-076847	Oryza brachyantha	83.04	0.00e+00	1246.00
IUUC-Ogl-076931	Oryza glaberrima	87.78	0.00e+00	1323.00
IUUC-Ogu-077963	Oryza glumaepatula	84.39	0.00e+00	1259.00
IUUC-Oin-079144	Oryza indica	87.28	0.00e+00	1312.00
IUUC-Olo-080947	Oryza longistaminata	79.03	0.00e+00	1193.00
IUUC-Ome-081723	Oryza meridionalis	82.57	0.00e+00	1256.00
IUUC-Oni-083067	Oryza nivara	87.28	0.00e+00	1314.00
IUUC-Opu-083429	Oryza punctata	87.42	0.00e+00	1320.00
IUUC-Oru-084534	Oryza rufipogon	84.27	0.00e+00	1259.00
IUUC-Osa-085788	Oryza sativa	87.66	0.00e+00	1320.00
IUUC-Ppa-095985	Physcomitrella patens	62.80	2.00e-148	518.00
IUUC-Pop-099951	Populus trichocarpa	65.26	0.00e+00	971.00
IUUC-Ppe-101896	Prunus persica	64.55	0.00e+00	932.00
IUUC-Smo-109593	Selaginella moellendorffii	50.40	0.00e+00	702.00
IUUC-Sit-110618	Setaria italica	90.17	0.00e+00	1353.00
IUUC-Sly-111127	Solanum lycopersicum	63.44	0.00e+00	914.00
IUUC-Stu-112404	Solanum tuberosum	63.90	0.00e+00	911.00
IUUC-Sbi-114046	Sorghum bicolor	96.26	0.00e+00	1420.00
IUUC-Tca-121754	Theobroma cacao	63.06	0.00e+00	927.00
IUUC-Tae-125446	Triticum aestivum	85.20	0.00e+00	1274.00
IUUC-Tur-126636	Triticum urartu	77.14	0.00e+00	1181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence