iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-134823

Ensembl Protein ID

Zm00001d021580_T002

UniProt Accession

B4FRD5; B4FRD5_MAIZE

Genbank Protein ID

ACF84678.1; ACR36548.1; ONM57567.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

BT039673; BT086195; CM007650

Gene Name

ZEAMMB73_Zm00001d021580

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d021580	Zm00001d021580_T002	Zm00001d021580_T002
Zm00001d021580	Zm00001d021580_T001	Zm00001d021580_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-06	30.6	301	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           ++s++++    +d +l++s++ D  +++WD+ t
   Q: 301  SGSIRSI-VrhPDlPLIASCGLDSYLRIWDTNT 332
           6789998.457999****************765 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPRTTVLESP GCPPLRALTT DILGLVKVVE AHARPAGAAK VVETWGAPDA SCAIVAASLA 60
DRATDPVLAV ARMNGVVELL NPLNGDTLAA VKAVGPAPND GGAEGDPLTA LHLFTRQASD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACTGTACT AGCCGGCGAG GACCACGTGT ACCCGCCACC GCGCCGCGCG GCTCCACCGT 60
TCGGCGGCGC TCGGGCACGG CACGCCGTAA AACCCTAGCT CTTGCGCCCC CTCCTCTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

zma:100272883

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000787	Aegilops tauschii	76.19	5.00e-171	593.00
IUUC-Aml-001460	Ailuropoda melanoleuca	32.07	9.00e-30	123.00
IUUC-Atr-002657	Amborella trichopoda	55.56	2.00e-113	402.00
IUUC-Aly-006380	Arabidopsis lyrata	52.37	4.00e-107	380.00
IUUC-Ath-007686	Arabidopsis thaliana	52.65	7.00e-108	383.00
IUUC-Ame-011942	Astyanax mexicanus	37.07	2.00e-26	112.00
IUUC-Bta-013382	Bos taurus	34.24	4.00e-30	125.00
IUUC-Bdi-014280	Brachypodium distachyon	68.41	3.00e-180	624.00
IUUC-Bra-017855	Brassica rapa	52.09	6.00e-107	380.00
IUUC-Cja-018933	Callithrix jacchus	34.31	1.00e-27	117.00
IUUC-Cfa-020634	Canis familiaris	33.22	2.00e-30	125.00
IUUC-Cpo-022089	Cavia porcellus	38.55	4.00e-26	111.00
IUUC-Csa-023835	Chlorocebus sabaeus	32.41	2.00e-30	126.00
IUUC-Cho-024385	Choloepus hoffmanni	44.26	1.00e-06	45.80
IUUC-Cin-025691	Ciona intestinalis	30.80	3.00e-22	98.60
IUUC-Dre-028473	Danio rerio	32.74	8.00e-27	114.00
IUUC-Dno-029687	Dasypus novemcinctus	36.41	1.00e-27	116.00
IUUC-Dme-031982	Drosophila melanogaster	27.63	2.00e-11	62.80
IUUC-Ete-032407	Echinops telfairi	43.33	3.00e-16	78.60
IUUC-Eca-033792	Equus caballus	33.15	1.00e-13	70.10
IUUC-Fca-036584	Felis catus	33.10	2.00e-30	126.00
IUUC-Gmo-039064	Gadus morhua	34.00	8.00e-29	120.00
IUUC-Gac-042170	Gasterosteus aculeatus	35.75	3.00e-26	111.00
IUUC-Gma-044150	Glycine max	55.15	2.00e-117	415.00
IUUC-Ggo-044955	Gorilla gorilla	35.15	1.00e-28	120.00
IUUC-Hsa-046615	Homo sapiens	31.72	4.00e-29	121.00
IUUC-Hvu-047119	Hordeum vulgare	67.41	1.00e-140	492.00
IUUC-Itr-048987	Ictidomys tridecemlineatus	33.07	8.00e-28	117.00
IUUC-Kpa-049188	Komagataella pastoris	25.14	3.00e-15	75.90
IUUC-Lch-050396	Latimeria chalumnae	32.26	1.00e-31	130.00
IUUC-Laf-054015	Loxodonta africana	37.99	1.00e-27	116.00
IUUC-Mcc-055589	Macaca mulatta	32.07	2.00e-29	122.00
IUUC-Mtr-057719	Medicago truncatula	54.02	2.00e-114	405.00
IUUC-Mmr-060801	Microcebus murinus	33.46	5.00e-29	121.00
IUUC-Mdo-062069	Monodelphis domestica	37.78	3.00e-26	112.00
IUUC-Mmu-063487	Mus musculus	33.48	2.00e-26	112.00
IUUC-Mpu-066542	Mustela putorius furo	33.19	1.00e-28	119.00
IUUC-Mlu-067520	Myotis lucifugus	36.90	2.00e-26	112.00
IUUC-Nle-069422	Nomascus leucogenys	32.41	1.00e-29	123.00
IUUC-Opr-070402	Ochotona princeps	28.38	7.00e-14	70.90
IUUC-Ont-072078	Oreochromis niloticus	35.36	6.00e-26	110.00
IUUC-Ocu-073886	Oryctolagus cuniculus	39.11	2.00e-27	115.00
IUUC-Obr-076206	Oryza brachyantha	72.75	5.00e-168	583.00
IUUC-Ola-087342	Oryzias latipes	32.14	5.00e-23	101.00
IUUC-Oga-088865	Otolemur garnettii	31.27	3.00e-28	119.00
IUUC-Oar-090030	Ovis aries	33.85	1.00e-29	123.00
IUUC-Pan-092461	Papio anubis	33.46	5.00e-29	121.00
IUUC-Psi-093061	Pelodiscus sinensis	37.14	2.00e-27	116.00
IUUC-Pma-094281	Petromyzon marinus	34.78	1.00e-23	103.00
IUUC-Ppa-095623	Physcomitrella patens	41.90	3.00e-83	301.00
IUUC-Pfo-097074	Poecilia formosa	37.02	2.00e-21	96.30
IUUC-Pab-098290	Pongo abelii	31.72	1.00e-28	120.00
IUUC-Pop-099602	Populus trichocarpa	59.50	3.00e-120	424.00
IUUC-Pca-100383	Procavia capensis	38.55	8.00e-27	114.00
IUUC-Ppe-101867	Prunus persica	58.29	3.00e-120	424.00
IUUC-Pva-103218	Pteropus vampyrus	38.64	2.00e-08	52.80
IUUC-Rno-105494	Rattus norvegicus	33.71	1.00e-28	120.00
IUUC-Sha-107127	Sarcophilus harrisii	35.55	1.00e-26	113.00
IUUC-Sit-110466	Setaria italica	89.43	0.00e+00	669.00
IUUC-Sbi-113854	Sorghum bicolor	87.47	0.00e+00	778.00
IUUC-Ssc-116144	Sus scrofa	35.65	8.00e-29	120.00
IUUC-Tru-118516	Takifugu rubripes	35.56	4.00e-24	105.00
IUUC-Tni-120527	Tetraodon nigroviridis	34.44	3.00e-25	108.00
IUUC-Tae-125457	Triticum aestivum	77.69	4.00e-175	607.00
IUUC-Tur-126054	Triticum urartu	76.80	3.00e-141	494.00
IUUC-Tbe-127232	Tupaia belangeri	26.64	3.00e-12	65.90
IUUC-Ttr-128529	Tursiops truncatus	31.72	6.00e-29	120.00
IUUC-Vpa-130703	Vicugna pacos	40.43	4.00e-21	95.10
IUUC-Vvi-131680	Vitis vinifera	56.40	4.00e-122	430.00
IUUC-Xtr-132802	Xenopus tropicalis	27.87	1.00e-10	60.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence