iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000000654.1	ENSONIT00000000827.1	ENSONIP00000000828.1
ENSONIG00000000654.1	ENSONIT00000000828.1	ENSONIP00000000829.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-11	42.5	237	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
            ++++a+ ++ + +v++  Dgt+  W++rt  
   Q: 237  AIHSVAWhHEgKQFVCSHSDGTLTTWNVRTPA 268
           59*****977799***************9975 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MKKFNIRKVL DGLTAASSSS SANAQPGTPR ENDVVQETLQ SEHFQLCKTV RHGFPYQPSS 60
MAFDPVQKIL AIGTQAGALR LFGRAGVECY CQHESNAAVI QLQFLINEGA LVSALADDSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAATACACC GTAACACCGG TCCTGCATCC GGGTGACGGC AGAGCGCAGA CTCAATCCCC 60
GCTGCAGTTC ACTGCGTTTC CGTAGCCACT TTGCTACCCG CTGAGCCCTG GTTGGGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000664--Lethal2_giant
IPR013905--Lgl_C_dom
IPR013577--LLGL2
IPR001388--Synaptobrevin
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50892--V_SNARE
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08596--Lgl_C
PF08366--LLGL

PRINTS

PR00962--LETHAL2GIANT

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000919	Aegilops tauschii	21.70	3.00e-21	98.20
IUUC-Ame-011623	Astyanax mexicanus	76.93	0.00e+00	1800.00
IUUC-Bdi-015011	Brachypodium distachyon	21.93	4.00e-20	94.00
IUUC-Cho-025086	Choloepus hoffmanni	58.26	0.00e+00	1313.00
IUUC-Dre-027619	Danio rerio	78.10	0.00e+00	1717.00
IUUC-Gac-041699	Gasterosteus aculeatus	86.10	0.00e+00	1911.00
IUUC-Hvu-047650	Hordeum vulgare	21.53	6.00e-20	93.20
IUUC-Lch-050258	Latimeria chalumnae	63.29	0.00e+00	1089.00
IUUC-Lpe-051115	Leersia perrieri	20.60	2.00e-19	91.70
IUUC-Laf-053669	Loxodonta africana	62.33	0.00e+00	1416.00
IUUC-Mor-057129	Magnaporthe oryzae	21.58	6.00e-15	76.60
IUUC-Mpo-057585	Magnaporthe poae	23.05	2.00e-16	81.30
IUUC-Mtr-057936	Medicago truncatula	26.20	3.00e-19	91.30
IUUC-Mac-065436	Musa acuminata	29.41	9.00e-13	69.70
IUUC-Oba-075180	Oryza barthii	22.18	4.00e-21	97.40
IUUC-Obr-076139	Oryza brachyantha	21.75	1.00e-18	89.00
IUUC-Ogl-077142	Oryza glaberrima	22.18	4.00e-21	97.40
IUUC-Ogu-079037	Oryza glumaepatula	21.83	3.00e-19	91.70
IUUC-Oin-079192	Oryza indica	21.83	9.00e-19	89.70
IUUC-Olo-080693	Oryza longistaminata	22.50	2.00e-17	85.10
IUUC-Oni-082885	Oryza nivara	22.01	6.00e-20	93.60
IUUC-Oru-084893	Oryza rufipogon	22.35	2.00e-17	84.70
IUUC-Osa-085916	Oryza sativa	21.83	7.00e-19	90.10
IUUC-Pno-095147	Phaeosphaeria nodorum	21.97	1.00e-10	62.80
IUUC-Pfo-096618	Poecilia formosa	85.73	0.00e+00	1922.00
IUUC-Pop-099380	Populus trichocarpa	26.47	5.00e-17	84.00
IUUC-Ppe-101373	Prunus persica	22.47	4.00e-23	103.00
IUUC-Sit-110386	Setaria italica	21.82	2.00e-22	102.00
IUUC-Sly-111338	Solanum lycopersicum	25.94	3.00e-18	86.30
IUUC-Stu-112417	Solanum tuberosum	26.32	3.00e-19	89.70
IUUC-Sar-113111	Sorex araneus	65.70	0.00e+00	1374.00
IUUC-Sbi-114175	Sorghum bicolor	21.43	3.00e-21	98.20
IUUC-Tru-118038	Takifugu rubripes	86.82	0.00e+00	1954.00
IUUC-Tni-120014	Tetraodon nigroviridis	86.82	0.00e+00	1952.00
IUUC-Tca-121612	Theobroma cacao	22.70	3.00e-21	98.20
IUUC-Tvi-122424	Trichoderma virens	24.51	4.00e-17	84.30
IUUC-Tae-125643	Triticum aestivum	21.99	7.00e-22	100.00
IUUC-Tur-126560	Triticum urartu	21.42	3.00e-18	88.20
IUUC-Ttr-129239	Tursiops truncatus	63.12	0.00e+00	1400.00
IUUC-Vpa-130524	Vicugna pacos	59.82	0.00e+00	1315.00
IUUC-Xma-133073	Xiphophorus maculatus	84.93	0.00e+00	1752.00
IUUC-Yli-134491	Yarrowia lipolytica	21.57	2.00e-17	85.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence