iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d023640	Zm00001d023640_T020	Zm00001d023640_T020
Zm00001d023640	Zm00001d023640_T017	Zm00001d023640_T017
Zm00001d023640	Zm00001d023640_T005	Zm00001d023640_T005
Zm00001d023640	Zm00001d023640_T008	Zm00001d023640_T008
Zm00001d023640	Zm00001d023640_T022	Zm00001d023640_T022
Zm00001d023640	Zm00001d023640_T013	Zm00001d023640_T013
Zm00001d023640	Zm00001d023640_T016	Zm00001d023640_T016
Zm00001d023640	Zm00001d023640_T034	Zm00001d023640_T034
Zm00001d023640	Zm00001d023640_T021	Zm00001d023640_T021
Zm00001d023640	Zm00001d023640_T048	Zm00001d023640_T048
Zm00001d023640	Zm00001d023640_T003	Zm00001d023640_T003
Zm00001d023640	Zm00001d023640_T015	Zm00001d023640_T015
Zm00001d023640	Zm00001d023640_T043	Zm00001d023640_T043
Zm00001d023640	Zm00001d023640_T004	Zm00001d023640_T004
Zm00001d023640	Zm00001d023640_T006	Zm00001d023640_T006
Zm00001d023640	Zm00001d023640_T011	Zm00001d023640_T011
Zm00001d023640	Zm00001d023640_T018	Zm00001d023640_T018
Zm00001d023640	Zm00001d023640_T002	Zm00001d023640_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.20e-55	189.0	293	489

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 170  ldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleL 259
           l+l+l+v+g +     ++  +++++++ e+leg+nky+ e+  ++q+a+k + +  +P+vL l+LkRf+++  ++   kin+++efpl+L
   Q: 293  LYLQLDVKGCR-----DVYASFDKYVEVEHLEGDNKYHAEQY-GLQDARKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQL 376
           78999999999.....99**********************97.69********************************************* PP
   S: 260  dls....pfctspeekqke........kkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg......... 327
           dl+    ++++ +  + ++         +++ L++v+vHsG++++GHY+a+++   +++W++fdD++Vt+ + ++ lee+          
   Q: 377  DLDrdngKYLAPDA-DRNRihffyadvACIFFLFSVLVHSGGVHGGHYYAFIRPtLSDQWYKFDDERVTKEDTKKALEEQYggeeelpqi 465
           ***55555555533.3333799999999*************************945677*************9999997779******** PP
   S: 328  ..............staYvlfYkr 337
                         s+aY+l+Y r
   Q: 466  npgfnntpfkftkySNAYMLVYIR 489
           **********************87 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MTMMTPPPLE QQQGDEMLVP HQELPVAGPE PAPQPMEVVA QTEPANTAET QPPEDPQTSR 60
FTWTIESFSR LNTKKHYSDA FVVGGYKWRV LIFPKGNNVD HLSLYLDVAD SGSLPYGWSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCACGCGAC CGACCCGTGC TCCGCTTCAC CATATCAGCA ACTTCCCCTC GTCTGCCTCG 60
GCCTCGGGCT CGCATCCGCC CTCGACCTCG GCCGTTCTTC CTCCTGTTCC CGCCGCCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence