iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-134924

UUCD1 version

UUC-ZeM-00716

Ensembl Protein ID

Zm00001d025048_T003

UniProt Accession

A0A1D6J4G2; A0A1D6J4G2_MAIZE

Genbank Protein ID

AQK42853.1

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

CM000786

Gene Name

ZEAMMB73_Zm00001d025048

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d025048	Zm00001d025048_T003	Zm00001d025048_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-49	166.2	487	526
UBD/Beta-Prp	7.30e-67	227.7	356	559

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH  +v+++af +d  +l+sGs D  +++W++++g+ lk+
   Q: 487  GHRQPVYSVAFsPDgEYLASGSLDQCLHIWSVKEGRILKT 526
           8***********999********************99875 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsl 100
           ++  +v++ ++++ +at s+d++i v ++ ++  ++ +sgh++ev+a+k++p+g++l+++s+D t+k+w++++ kcv  +k+h+++++++
   Q: 356  APTLDVDW-RNNNSFATCSTDNMIYVCKIGEQRPVKAFSGHQSEVNAIKWDPTGSLLASCSDDWTAKIWSMKQDKCVFDFKEHTKEIYTI 444
           55566777.77888**************************************************************************** PP
   S: 101  sfsp.........sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtd 181
           ++sp         ++  l+s+s d+ti++w++e+g  l+  lsgh++ v +v+++pdg +l+sGslD+++ +W++k g++l+t +g  t+
   Q: 445  RWSPtgpgtnnpnQQLLLASASFDSTIKLWEVEQGCLLY-SLSGHRQPVYSVAFSPDGEYLASGSLDQCLHIWSVKEGRILKTYRG--TG 531
           ****888887763336899*******************9.*********************************************9..** PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdl 209
            +  + ++++g  ++++  ++tv + d+
   Q: 532  GIFEVCWNKEGSKIAACFSNNTVCVMDF 559
           ***********************99887 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MGVLTSTELN FLVFRYLQES GFIHAAFTLG YEAGIHKGGI DGNAVPPGAL ITIVQKGLQY 60
IELEANNDDN DDEVERDFAL LEPLEIITKD VEELQQIVKK RKMERSQTER EKDKGKEKER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCGTGCCTG GAGAGGCTTA CCGCCGTTCT CGGCCACGCC GCTGCGTGCC TGCGTTCCTC 60
CTCGTCTCCT CCGCAGCTCC GACGGCGCCC TCGCCCGCGC CGCCTGCTAT GGGTGTGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000916	Aegilops tauschii	92.25	8.00e-79	285.00
IUUC-Aml-001717	Ailuropoda melanoleuca	63.46	1.00e-134	473.00
IUUC-Atr-002514	Amborella trichopoda	80.16	0.00e+00	639.00
IUUC-Apl-003708	Anas platyrhynchos	63.46	1.00e-134	472.00
IUUC-Aly-005622	Arabidopsis lyrata	72.22	2.00e-155	541.00
IUUC-Ath-007137	Arabidopsis thaliana	70.10	6.00e-157	547.00
IUUC-Ame-011601	Astyanax mexicanus	63.93	2.00e-136	478.00
IUUC-Bta-012418	Bos taurus	62.91	9.00e-142	496.00
IUUC-Bdi-014315	Brachypodium distachyon	88.95	0.00e+00	933.00
IUUC-Bol-016277	Brassica oleracea	69.69	7.00e-159	553.00
IUUC-Bra-016944	Brassica rapa	69.43	2.00e-158	551.00
IUUC-Cja-018832	Callithrix jacchus	63.46	1.00e-134	473.00
IUUC-Cfa-020029	Canis familiaris	63.46	1.00e-134	473.00
IUUC-Cpo-021682	Cavia porcellus	61.66	7.00e-141	493.00
IUUC-Csa-024075	Chlorocebus sabaeus	63.46	1.00e-134	473.00
IUUC-Dre-027906	Danio rerio	63.11	2.00e-135	474.00
IUUC-Dno-029196	Dasypus novemcinctus	63.46	8.00e-135	473.00
IUUC-Dor-030732	Dipodomys ordii	63.41	1.00e-130	459.00
IUUC-Dme-031939	Drosophila melanogaster	59.63	2.00e-127	449.00
IUUC-Ete-033150	Echinops telfairi	62.84	2.00e-119	422.00
IUUC-Eeu-034952	Erinaceus europaeus	56.67	1.00e-113	402.00
IUUC-Fca-035734	Felis catus	63.46	8.00e-135	473.00
IUUC-Gac-041844	Gasterosteus aculeatus	63.46	4.00e-143	500.00
IUUC-Gma-044208	Glycine max	64.44	0.00e+00	723.00
IUUC-Ggo-044882	Gorilla gorilla	63.46	1.00e-134	473.00
IUUC-Hsa-046488	Homo sapiens	63.46	1.00e-134	473.00
IUUC-Itr-047958	Ictidomys tridecemlineatus	63.46	1.00e-133	468.00
IUUC-Kpa-049338	Komagataella pastoris	28.91	1.00e-31	130.00
IUUC-Lpe-051084	Leersia perrieri	86.63	0.00e+00	932.00
IUUC-Loc-052030	Lepisosteus oculatus	64.01	3.00e-144	504.00
IUUC-Laf-054280	Loxodonta africana	63.19	2.00e-142	498.00
IUUC-Mcc-055203	Macaca mulatta	63.46	1.00e-134	472.00
IUUC-Mvi-060557	Microbotryum violaceum	36.98	7.00e-71	261.00
IUUC-Mmr-060925	Microcebus murinus	63.46	7.00e-134	470.00
IUUC-Mdo-062078	Monodelphis domestica	63.19	3.00e-134	471.00
IUUC-Mac-065508	Musa acuminata	72.04	2.00e-178	617.00
IUUC-Mpu-066741	Mustela putorius furo	63.46	1.00e-134	473.00
IUUC-Mlu-068152	Myotis lucifugus	63.46	7.00e-135	473.00
IUUC-Nle-069229	Nomascus leucogenys	63.46	1.00e-134	473.00
IUUC-Opr-070277	Ochotona princeps	52.23	2.00e-99	355.00
IUUC-Ont-071569	Oreochromis niloticus	64.29	1.00e-144	506.00
IUUC-Oba-075618	Oryza barthii	86.45	0.00e+00	909.00
IUUC-Obr-076718	Oryza brachyantha	85.03	0.00e+00	917.00
IUUC-Ogl-077302	Oryza glaberrima	89.48	0.00e+00	959.00
IUUC-Ogu-078718	Oryza glumaepatula	89.66	0.00e+00	960.00
IUUC-Oin-079515	Oryza indica	82.55	0.00e+00	678.00
IUUC-Olo-080427	Oryza longistaminata	81.36	0.00e+00	852.00
IUUC-Ome-081696	Oryza meridionalis	88.41	0.00e+00	939.00
IUUC-Oni-082137	Oryza nivara	89.66	0.00e+00	960.00
IUUC-Opu-083505	Oryza punctata	86.45	0.00e+00	912.00
IUUC-Oru-085276	Oryza rufipogon	89.48	0.00e+00	959.00
IUUC-Osa-085791	Oryza sativa	89.66	0.00e+00	960.00
IUUC-Ola-087365	Oryzias latipes	62.91	8.00e-142	496.00
IUUC-Oga-088357	Otolemur garnettii	60.44	5.00e-124	437.00
IUUC-Oar-089214	Ovis aries	63.19	2.00e-142	498.00
IUUC-Ptr-091532	Pan troglodytes	63.46	1.00e-134	473.00
IUUC-Pan-091927	Papio anubis	63.46	1.00e-134	473.00
IUUC-Pma-094105	Petromyzon marinus	60.15	1.00e-39	155.00
IUUC-Ppa-095868	Physcomitrella patens	79.83	1.00e-170	592.00
IUUC-Pab-098705	Pongo abelii	63.46	1.00e-134	473.00
IUUC-Pop-098989	Populus trichocarpa	77.25	4.00e-168	583.00
IUUC-Pca-100256	Procavia capensis	63.06	2.00e-131	462.00
IUUC-Ppe-101572	Prunus persica	65.74	0.00e+00	671.00
IUUC-Sha-106636	Sarcophilus harrisii	63.19	3.00e-134	471.00
IUUC-Smo-109301	Selaginella moellendorffii	78.18	7.00e-175	606.00
IUUC-Sit-110710	Setaria italica	92.87	0.00e+00	948.00
IUUC-Sly-111336	Solanum lycopersicum	77.89	2.00e-176	612.00
IUUC-Stu-112786	Solanum tuberosum	57.62	0.00e+00	649.00
IUUC-Sar-112971	Sorex araneus	54.85	2.00e-118	418.00
IUUC-Sbi-114420	Sorghum bicolor	96.79	0.00e+00	997.00
IUUC-Sre-115175	Sporisorium reilianum	43.87	5.00e-59	222.00
IUUC-Ssc-115695	Sus scrofa	63.46	8.00e-135	473.00
IUUC-Tsy-119424	Tarsius syrichta	50.70	9.00e-94	337.00
IUUC-Tni-120861	Tetraodon nigroviridis	51.42	4.00e-161	560.00
IUUC-Tca-121739	Theobroma cacao	72.59	4.00e-171	594.00
IUUC-Tae-125368	Triticum aestivum	87.41	0.00e+00	929.00
IUUC-Tur-126856	Triticum urartu	81.70	2.00e-164	571.00
IUUC-Tme-127126	Tuber melanosporum	34.91	9.00e-50	190.00
IUUC-Tbe-127767	Tupaia belangeri	65.32	9.00e-121	425.00
IUUC-Uma-129469	Ustilago maydis	44.27	8.00e-60	224.00
IUUC-Vpa-130768	Vicugna pacos	63.06	1.00e-131	462.00
IUUC-Vvi-131193	Vitis vinifera	75.00	5.00e-174	603.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence