iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112184

Ensembl Protein ID

PGSC0003DMT400012523

UniProt Accession

M1A1C6; M1A1C6_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400004887	PGSC0003DMT400012523	PGSC0003DMT400012523
PGSC0003DMG400004887	PGSC0003DMT400012524	PGSC0003DMT400012524
PGSC0003DMG400004887	PGSC0003DMT400012525	PGSC0003DMT400012525

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.10e-08	35.4	200	251

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrsk 54
           + C  Cge+++ ++  ++C++C++wfH +C+k++   + +  +++ Cp+C++k
   Q: 200  TLCGACGENYAADEFWICCDICEKWFHGKCVKIT-PAKAEHIKQYKCPSCSHK 251
           68************99******************.888888888******986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MDGGGGGEQF DSRTVEDVFG DFKRRRTALI KALTVDVEEF YQQCDPEKEN LCLYGLPNEQ 60
WEVNLPAEEV PPELPEPALG INFARDGMED KDWLSLVAVH SDSWLLSVAF YFGARFGFDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTTCCTCA TCATCTTCTC TTCACTTATT AAAACCCTTT TTCCCATTCT TCTTTGTTTC 60
TACTCACAAT TCAAAATCCC CTCCTCCCTC TCTTTTCCCC CCTTGAACTG TGCAGCCGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

sot:102592153

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002983	Amborella trichopoda	74.81	1.00e-87	314.00
IUUC-Gma-043342	Glycine max	75.50	2.00e-88	317.00
IUUC-Ppe-101390	Prunus persica	76.40	6.00e-91	325.00
IUUC-Sce-106445	Saccharomyces cerevisiae	32.65	7.00e-04	37.70
IUUC-Sly-111914	Solanum lycopersicum	96.51	5.00e-107	379.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence