iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135249

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Nucleotide binding protein

Genbank Nucleotide ID

CM000786

Gene Name

ZEAMMB73_Zm00001d025699

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d025699	Zm00001d025699_T001	Zm00001d025699_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-26	91.1	211	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+d v+++a   d +ll s s+D+t+kvW   + ++l+s
   Q: 211  HADAVSGVAAsADgRLLFSVSWDKTLKVWAAPSLRCLQS 249
           999*****9995559***************999999986 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MKLLPRLCMA TGTGTGDGDG EGSASSSTKR ATAVSSSSST VSTSSAAAAA VSESSSSTSL 60
PSLSSATSAS LAASFVHVAT LLPLSARPSP CAAVVAATGG SLPGLVVARP SCVALHDLST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTTC TTCCGCGCCT CTGCATGGCC ACCGGCACCG GCACCGGCGA CGGAGACGGG 60
GAGGGGAGCG CAAGCAGCAG CACCAAGCGG GCCACAGCGG TGTCGTCCTC CTCGTCGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006280	Arabidopsis lyrata	48.82	4.00e-73	268.00
IUUC-Ath-006951	Arabidopsis thaliana	49.49	1.00e-73	269.00
IUUC-Bdi-015036	Brachypodium distachyon	72.96	9.00e-101	359.00
IUUC-Bol-015247	Brassica oleracea	49.49	3.00e-74	271.00
IUUC-Bra-017464	Brassica rapa	49.16	8.00e-74	270.00
IUUC-Gma-043162	Glycine max	45.50	1.00e-80	293.00
IUUC-Hvu-047047	Hordeum vulgare	81.73	7.00e-112	396.00
IUUC-Lpe-051055	Leersia perrieri	65.04	2.00e-87	315.00
IUUC-Mtr-057789	Medicago truncatula	43.42	9.00e-76	276.00
IUUC-Mac-065257	Musa acuminata	56.71	1.00e-77	283.00
IUUC-Ogl-077746	Oryza glaberrima	72.70	3.00e-93	335.00
IUUC-Ogu-078557	Oryza glumaepatula	72.70	2.00e-93	335.00
IUUC-Oin-079061	Oryza indica	72.70	2.00e-93	335.00
IUUC-Oni-083112	Oryza nivara	72.70	4.00e-93	334.00
IUUC-Opu-083152	Oryza punctata	78.03	6.00e-112	397.00
IUUC-Oru-084254	Oryza rufipogon	72.70	4.00e-93	334.00
IUUC-Osa-086021	Oryza sativa	77.46	7.00e-93	333.00
IUUC-Pop-100092	Populus trichocarpa	47.97	3.00e-74	271.00
IUUC-Ppe-101598	Prunus persica	48.82	2.00e-73	269.00
IUUC-Smo-108947	Selaginella moellendorffii	39.94	3.00e-41	162.00
IUUC-Sly-111566	Solanum lycopersicum	45.12	8.00e-71	260.00
IUUC-Sbi-114374	Sorghum bicolor	81.63	6.00e-116	410.00
IUUC-Tca-121847	Theobroma cacao	50.34	4.00e-75	274.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence