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Tag Content
UUCD2 ID IUUC-Zma-135603
UUCD1 version UUC-ZeM-00720
Ensembl Protein ID Zm00001d026621_T006
UniProt Accession K7UN87; K7UN87_MAIZE
Genbank Protein ID AQK47259.1; AQK47261.1; AQK47264.1; AQK47273.1
Protein Name Katanin p80 WD40 repeat-containing subunit B1 homolog
Genbank Nucleotide ID CM000786; CM000786; CM000786; CM000786
Gene Name ZEAMMB73_Zm00001d026621
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Zm00001d026621 Zm00001d026621_T006 Zm00001d026621_T006
Zm00001d026621 Zm00001d026621_T032 Zm00001d026621_T032
Zm00001d026621 Zm00001d026621_T033 Zm00001d026621_T033
Zm00001d026621 Zm00001d026621_T034 Zm00001d026621_T034
Zm00001d026621 Zm00001d026621_T009 Zm00001d026621_T009
Zm00001d026621 Zm00001d026621_T019 Zm00001d026621_T019
Zm00001d026621 Zm00001d026621_T027 Zm00001d026621_T027
Zm00001d026621 Zm00001d026621_T002 Zm00001d026621_T002
Zm00001d026621 Zm00001d026621_T028 Zm00001d026621_T028
Zm00001d026621 Zm00001d026621_T003 Zm00001d026621_T003
Zm00001d026621 Zm00001d026621_T004 Zm00001d026621_T004
Zm00001d026621 Zm00001d026621_T015 Zm00001d026621_T015
Zm00001d026621 Zm00001d026621_T016 Zm00001d026621_T016
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.60e-37 125.5 143 181
UBD/Beta-Prp 2.70e-57 196.2 16 266
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt +v++++f +d + +vsG+ D+ +k+WDl+ g+ll+
   Q: 143  GHTRGVNAIRFtPDgRWVVSGGEDNIVKLWDLTAGKLLH 181
           8***********99999******************9987 PP
   

   UBD/Beta-Prp
   S: 8    hhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgheds 96
           +h s ++c+k+  + +++l+tg++d+++ +w + +++ + slsgh+++v +v f++++ + + g+  +tik+wdl+  k+v+tl+gh ++
   Q: 16   AHASNVNCLKIgRKTSRVLVTGGEDHKVNLWAIGKPNSILSLSGHTSAVESVGFDSTEVFVAAGAASGTIKLWDLEEAKIVRTLTGHRSN 105
           68889999***999********************************************9999**************************** PP
   S: 97   vlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysl 186
            +s++f+p g++++sGs d  +++wd++ + c++ t +gh++ vn +++ pdg+ +vsG+ D++v+lWdl  gkll++++  h+++++++
   Q: 106  CMSVDFHPFGEFFASGSLDTNLKIWDIRRKNCIH-TYKGHTRGVNAIRFTPDGRWVVSGGEDNIVKLWDLTAGKLLHEFKC-HEGQIQCI 193
           **********************************.********************************************98.******** PP
   S: 187  sfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
           +f++  + l++gs d+tvk+wdl+t e + +    t+ v+s+ f p++  l++g  ++s++++  +   +  t+
   Q: 194  DFHPHEFLLATGSADKTVKFWDLETFELIGSTGPETTGVRSMTFNPDGRTLLCG-LHESLKVFSWEPIRCHDTV 266
           *********************************************999999999.5778888655555555554 PP
   
Organism Zea mays
Functional Description
(View)

Functional Description


     May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
 May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
Protein Sequence
(Fasta)
MATNTKRAYK LQEFVAHASN VNCLKIGRKT SRVLVTGGED HKVNLWAIGK PNSILSLSGH 60
TSAVESVGFD STEVFVAAGA ASGTIKLWDL EEAKIVRTLT GHRSNCMSVD FHPFGEFFAS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Zma-135603|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTTTTTAATT CGATTTTTAT TCGAACCAAG CCCCATCTCT CTCGTCTTCC ACCTCCTGCG 60
TCCTGCCTTC CCCACCCCCA CCGCACAGCG CCCGGCCGGC CCCAACCAGA CAGCTCCGTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Zma-135603|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF13925--Katanin_con80
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing
KEGG zma:103642198
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002187 Ailuropoda melanoleuca 53.55 1.00e-102 366.00
IUUC-Atr-002899 Amborella trichopoda 69.92 0.00e+00 665.00
IUUC-Aca-004635 Anolis carolinensis 51.16 2.00e-91 330.00
IUUC-Aly-005711 Arabidopsis lyrata 63.86 0.00e+00 637.00
IUUC-Ath-007606 Arabidopsis thaliana 63.65 0.00e+00 635.00
IUUC-Acl-008307 Aspergillus clavatus 32.43 1.00e-29 124.00
IUUC-Bta-012527 Bos taurus 54.28 9.00e-106 377.00
IUUC-Bol-016374 Brassica oleracea 60.52 0.00e+00 627.00
IUUC-Bra-017390 Brassica rapa 59.31 3.00e-177 615.00
IUUC-Cja-019706 Callithrix jacchus 53.04 2.00e-105 375.00
IUUC-Cfa-020139 Canis familiaris 46.45 2.00e-98 352.00
IUUC-Cpo-021710 Cavia porcellus 53.95 2.00e-105 376.00
IUUC-Cre-022746 Chlamydomonas reinhardtii 45.31 6.00e-84 305.00
IUUC-Csa-023546 Chlorocebus sabaeus 54.67 1.00e-101 363.00
IUUC-Cin-025156 Ciona intestinalis 47.51 3.00e-89 322.00
IUUC-Csv-025962 Ciona savignyi 50.00 7.00e-89 319.00
IUUC-Dre-028215 Danio rerio 51.64 3.00e-102 365.00
IUUC-Dno-029314 Dasypus novemcinctus 54.61 3.00e-105 375.00
IUUC-Dor-030482 Dipodomys ordii 54.28 3.00e-106 378.00
IUUC-Eca-034143 Equus caballus 54.52 8.00e-103 367.00
IUUC-Fca-035924 Felis catus 54.61 6.00e-106 377.00
IUUC-Fal-037387 Ficedula albicollis 53.14 4.00e-105 375.00
IUUC-Gmo-038692 Gadus morhua 52.15 2.00e-102 366.00
IUUC-Gga-040597 Gallus gallus 52.98 2.00e-104 372.00
IUUC-Gac-042004 Gasterosteus aculeatus 49.39 4.00e-99 355.00
IUUC-Gma-044322 Glycine max 73.82 0.00e+00 682.00
IUUC-Ggo-044761 Gorilla gorilla 53.04 2.00e-105 375.00
IUUC-Hsa-045698 Homo sapiens 51.66 5.00e-106 377.00
IUUC-Itr-048697 Ictidomys tridecemlineatus 54.28 7.00e-106 377.00
IUUC-Lch-049674 Latimeria chalumnae 46.97 7.00e-108 384.00
IUUC-Lpe-051554 Leersia perrieri 75.24 0.00e+00 1420.00
IUUC-Loc-052623 Lepisosteus oculatus 53.80 1.00e-100 360.00
IUUC-Laf-054587 Loxodonta africana 54.28 6.00e-106 377.00
IUUC-Mcc-055851 Macaca mulatta 53.04 2.00e-105 375.00
IUUC-Meu-056704 Macropus eugenii 54.85 2.00e-105 376.00
IUUC-Mtr-058053 Medicago truncatula 72.44 0.00e+00 681.00
IUUC-Mga-059608 Meleagris gallopavo 51.69 4.00e-101 361.00
IUUC-Mmr-061154 Microcebus murinus 54.28 1.00e-105 376.00
IUUC-Mdo-062365 Monodelphis domestica 54.52 4.00e-105 375.00
IUUC-Mmu-063754 Mus musculus 52.85 3.00e-106 379.00
IUUC-Mac-064439 Musa acuminata 65.04 0.00e+00 679.00
IUUC-Mpu-066245 Mustela putorius furo 54.93 4.00e-106 378.00
IUUC-Mlu-067692 Myotis lucifugus 54.22 4.00e-105 374.00
IUUC-Nle-070051 Nomascus leucogenys 52.72 2.00e-104 372.00
IUUC-Opr-070855 Ochotona princeps 53.87 2.00e-105 376.00
IUUC-Ont-071883 Oreochromis niloticus 50.83 4.00e-98 352.00
IUUC-Oan-073293 Ornithorhynchus anatinus 55.16 1.00e-101 363.00
IUUC-Ocu-074644 Oryctolagus cuniculus 54.28 7.00e-106 377.00
IUUC-Ome-081239 Oryza meridionalis 72.64 0.00e+00 1310.00
IUUC-Osa-085988 Oryza sativa 71.34 0.00e+00 1302.00
IUUC-Ola-087483 Oryzias latipes 49.50 2.00e-94 339.00
IUUC-Oga-087964 Otolemur garnettii 54.05 1.00e-105 376.00
IUUC-Oar-089483 Ovis aries 53.87 8.00e-104 370.00
IUUC-Ptr-091387 Pan troglodytes 51.66 5.00e-106 377.00
IUUC-Pan-092623 Papio anubis 53.04 2.00e-105 375.00
IUUC-Psi-093830 Pelodiscus sinensis 53.23 4.00e-99 355.00
IUUC-Pfo-096755 Poecilia formosa 48.07 3.00e-99 355.00
IUUC-Pab-097564 Pongo abelii 53.04 6.00e-105 374.00
IUUC-Pop-099149 Populus trichocarpa 69.37 0.00e+00 690.00
IUUC-Pca-100357 Procavia capensis 58.33 1.00e-76 280.00
IUUC-Ppe-101237 Prunus persica 72.35 0.00e+00 705.00
IUUC-Pva-102397 Pteropus vampyrus 50.00 7.00e-93 334.00
IUUC-Rno-105349 Rattus norvegicus 54.37 2.00e-106 379.00
IUUC-Sly-111307 Solanum lycopersicum 73.12 0.00e+00 671.00
IUUC-Sar-112953 Sorex araneus 46.49 6.00e-58 218.00
IUUC-Tgu-117461 Taeniopygia guttata 53.14 1.00e-105 377.00
IUUC-Tru-117865 Takifugu rubripes 48.84 6.00e-92 331.00
IUUC-Tsy-119036 Tarsius syrichta 61.16 3.00e-41 162.00
IUUC-Tni-120903 Tetraodon nigroviridis 47.11 1.00e-91 330.00
IUUC-Tca-121185 Theobroma cacao 54.22 0.00e+00 922.00
IUUC-Ttr-128172 Tursiops truncatus 54.28 8.00e-106 377.00
IUUC-Vvi-131489 Vitis vinifera 53.33 0.00e+00 862.00
IUUC-Xtr-132915 Xenopus tropicalis 52.92 2.00e-100 359.00
Created Date 25-Jun-2017

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