iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d028318	Zm00001d028318_T001	Zm00001d028318_T001
Zm00001d028318	Zm00001d028318_T002	Zm00001d028318_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.10e-10	43.2	3	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 69   sprellkalkkeaeefsgyeqqDaqEflaflldqleeelkk....eknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqi 154
           +p+ +++al+    +f+ ++qqDa+E + +ll +l++e+ +    ++++  + + +++k  +++e +  + k+ k+ +   F+g++ s +
   Q: 3    NPHGVMHALSLNVGHFNLTRQQDASEAFLHLLISLRDEFAHcyvpHRSSLADITLSDSKVYKQREGNLPECKRWKQNLFGPFDGTVGSIL 92
           68899999999999*************************776654333333333344445555556667777777999999********* PP
   S: 155  kclecdnvs.sreepfldlsl.pvpgkeetkke..slqdcLesftkeeelegenkyycekckkkqeaekkl 221
            c +c +v    +e+f  l+l pv + +   ++  sl dcL+ ft  e+l++   y c++c +   a k l
   Q: 93   SCRNCSSVLsLDFENFHCLPLlPVLNANGDITSgcSLVDCLKYFTVVEHLDN---YRCDRCWHII-AAKYL 159
           *******97699*******9647775553333255***************95...******8655.55555 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MLNPHGVMHA LSLNVGHFNL TRQQDASEAF LHLLISLRDE FAHCYVPHRS SLADITLSDS 60
KVYKQREGNL PECKRWKQNL FGPFDGTVGS ILSCRNCSSV LSLDFENFHC LPLLPVLNAN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTATTATT GTACTTGAGC TTTGCATGTC GCAGACTTAA GCATAGTTCG AGATGAAAGG 60
ACTATGTTGA ATCCACATGG AGTAATGCAT GCTTTGAGTT TGAATGTTGG TCACTTCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR028889--USP_dom

PROSITE

PS50235--USP_3

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence