iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099025

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-conjugating enzyme family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_832690; POPTR_0008s10580g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s10580	POPTR_0008s10580.1	POPTR_0008s10580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	7.70e-27	94.9	15	127

Active Site

Position(s)	Description	Evidence
93	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilk.eee 90
           R+ +e+ke++++p++ ++  p +e +++ew+++i Gp +t +egg+++ +i++p +YPfkPP++++lt+  ++ +++++k+Clsi + ++e
   Q: 15   RILQEVKEMQSNPSDDFMSLPLEE-NIFEWQFAIRGPGETEFEGGIYHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNhHPE 102
           899*********************.9*******************************************..9**************6599* PP
   S: 91   kWspalsvesvllsiqsll.aepnp 114
           +W+p +sv++ l+++++++ ++pn 
   Q: 103  HWQPSWSVRTALVALIAFMpTSPNG 127
           *******************777875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAEDKYNLKN PAVKRILQEV KEMQSNPSDD FMSLPLEENI FEWQFAIRGP GETEFEGGIY 60
HGRIQLPAEY PFKPPSFMLL TPNGRFETQT KICLSISNHH PEHWQPSWSV RTALVALIAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAATATCTC TTCAACAGGC ATTTCATCGC CTCCAGCTCC AACACCAACA AGCAGATATC 60
TATGTTGTCA TCCTTTCCTT AATATACTTT CAACCCTCCA TTCTCGTCTA CACACAGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding

KEGG

pop:POPTR_0008s10580g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001180	Aegilops tauschii	44.42	2.00e-76	279.00
IUUC-Aml-002404	Ailuropoda melanoleuca	63.01	3.00e-56	211.00
IUUC-Atr-002806	Amborella trichopoda	85.16	4.00e-95	340.00
IUUC-Apl-003507	Anas platyrhynchos	63.50	2.00e-52	199.00
IUUC-Aca-004697	Anolis carolinensis	63.01	7.00e-56	209.00
IUUC-Aly-005556	Arabidopsis lyrata	65.38	2.00e-104	371.00
IUUC-Ath-007477	Arabidopsis thaliana	65.81	4.00e-113	400.00
IUUC-Ang-009509	Aspergillus niger	51.59	3.00e-36	143.00
IUUC-Ame-010806	Astyanax mexicanus	63.64	1.00e-52	199.00
IUUC-Bci-013709	Botrytis cinerea	51.75	3.00e-43	168.00
IUUC-Bdi-014694	Brachypodium distachyon	58.04	6.00e-95	340.00
IUUC-Bol-016079	Brassica oleracea	66.98	3.00e-115	407.00
IUUC-Bra-017267	Brassica rapa	66.67	3.00e-105	374.00
IUUC-Cja-019087	Callithrix jacchus	63.01	3.00e-56	211.00
IUUC-Cfa-020218	Canis familiaris	62.77	6.00e-52	197.00
IUUC-Cpo-022552	Cavia porcellus	63.01	5.00e-56	210.00
IUUC-Cre-022888	Chlamydomonas reinhardtii	70.35	5.00e-74	269.00
IUUC-Csa-024028	Chlorocebus sabaeus	63.01	3.00e-56	211.00
IUUC-Cho-024606	Choloepus hoffmanni	69.44	4.00e-30	124.00
IUUC-Cne-026839	Cryptococcus neoformans	43.98	9.00e-32	129.00
IUUC-Cme-027189	Cyanidioschyzon merolae	57.93	1.00e-39	156.00
IUUC-Dre-027569	Danio rerio	63.01	7.00e-57	213.00
IUUC-Dno-029214	Dasypus novemcinctus	62.33	1.00e-55	209.00
IUUC-Dse-031537	Dothistroma septosporum	53.52	3.00e-44	171.00
IUUC-Ete-033083	Echinops telfairi	63.01	3.00e-56	211.00
IUUC-Eca-034179	Equus caballus	62.77	4.00e-52	197.00
IUUC-Eeu-035115	Erinaceus europaeus	62.16	9.00e-42	162.00
IUUC-Fca-036083	Felis catus	63.01	3.00e-56	211.00
IUUC-Fal-037289	Ficedula albicollis	63.50	4.00e-52	197.00
IUUC-Fso-038254	Fusarium solani	52.05	3.00e-44	171.00
IUUC-Gga-041156	Gallus gallus	45.45	7.00e-54	203.00
IUUC-Gma-044356	Glycine max	72.06	1.00e-128	452.00
IUUC-Ggo-044450	Gorilla gorilla	63.01	3.00e-56	211.00
IUUC-Hsa-046496	Homo sapiens	63.01	3.00e-56	211.00
IUUC-Hvu-047328	Hordeum vulgare	58.07	3.00e-90	324.00
IUUC-Itr-048629	Ictidomys tridecemlineatus	62.33	6.00e-56	210.00
IUUC-Lch-050348	Latimeria chalumnae	62.33	4.00e-56	211.00
IUUC-Lpe-050862	Leersia perrieri	57.28	3.00e-91	327.00
IUUC-Loc-052465	Lepisosteus oculatus	57.66	3.00e-44	171.00
IUUC-Lma-053257	Leptosphaeria maculans	55.24	2.00e-44	171.00
IUUC-Laf-053830	Loxodonta africana	63.01	3.00e-56	211.00
IUUC-Mcc-054880	Macaca mulatta	63.01	3.00e-56	211.00
IUUC-Mtr-058479	Medicago truncatula	71.52	9.00e-122	429.00
IUUC-Mga-059321	Meleagris gallopavo	63.50	3.00e-52	197.00
IUUC-Mdo-062391	Monodelphis domestica	55.28	1.00e-51	196.00
IUUC-Mmu-064049	Mus musculus	63.01	5.00e-56	210.00
IUUC-Mac-064669	Musa acuminata	67.74	4.00e-107	380.00
IUUC-Mpu-066177	Mustela putorius furo	62.12	1.00e-49	189.00
IUUC-Mlu-067037	Myotis lucifugus	62.77	6.00e-52	197.00
IUUC-Nle-069166	Nomascus leucogenys	63.01	3.00e-56	211.00
IUUC-Ont-072096	Oreochromis niloticus	53.51	1.00e-53	202.00
IUUC-Ocu-074815	Oryctolagus cuniculus	63.01	3.00e-56	211.00
IUUC-Oba-075649	Oryza barthii	56.47	1.00e-90	325.00
IUUC-Obr-076169	Oryza brachyantha	58.99	3.00e-92	331.00
IUUC-Ogl-077144	Oryza glaberrima	56.47	1.00e-90	325.00
IUUC-Ogu-078255	Oryza glumaepatula	56.78	4.00e-91	327.00
IUUC-Oin-079510	Oryza indica	55.84	2.00e-88	318.00
IUUC-Olo-080589	Oryza longistaminata	50.56	5.00e-85	307.00
IUUC-Ome-081849	Oryza meridionalis	55.15	2.00e-89	321.00
IUUC-Oni-082959	Oryza nivara	56.15	3.00e-90	324.00
IUUC-Oru-084215	Oryza rufipogon	56.47	9.00e-91	326.00
IUUC-Osa-085722	Oryza sativa	56.47	9.00e-91	326.00
IUUC-Ola-086717	Oryzias latipes	60.14	6.00e-53	200.00
IUUC-Olu-087750	Ostreococcus lucimarinus	67.89	6.00e-41	158.00
IUUC-Oga-088848	Otolemur garnettii	63.64	2.00e-55	208.00
IUUC-Oar-090134	Ovis aries	62.77	3.00e-52	197.00
IUUC-Ptr-091314	Pan troglodytes	63.01	3.00e-56	211.00
IUUC-Pan-092103	Papio anubis	63.01	3.00e-56	211.00
IUUC-Ppa-095836	Physcomitrella patens	81.46	4.00e-89	320.00
IUUC-Pfo-096964	Poecilia formosa	62.33	2.00e-56	212.00
IUUC-Pab-097857	Pongo abelii	63.01	3.00e-56	211.00
IUUC-Pva-102297	Pteropus vampyrus	62.62	1.00e-40	159.00
IUUC-Pyt-104824	Pyrenophora triticirepentis	58.41	4.00e-36	144.00
IUUC-Rno-105336	Rattus norvegicus	63.01	5.00e-56	210.00
IUUC-Sha-107324	Sarcophilus harrisii	63.01	2.00e-56	211.00
IUUC-Smo-109196	Selaginella moellendorffii	78.77	5.00e-84	303.00
IUUC-Sit-110794	Setaria italica	59.29	1.00e-93	335.00
IUUC-Sly-111585	Solanum lycopersicum	69.45	2.00e-113	401.00
IUUC-Stu-111996	Solanum tuberosum	69.13	2.00e-112	398.00
IUUC-Sbi-114593	Sorghum bicolor	60.13	6.00e-95	339.00
IUUC-Ssc-115523	Sus scrofa	63.01	4.00e-56	210.00
IUUC-Tgu-116966	Taeniopygia guttata	63.70	3.00e-56	211.00
IUUC-Tru-117737	Takifugu rubripes	63.70	4.00e-57	214.00
IUUC-Tca-120992	Theobroma cacao	77.74	1.00e-127	448.00
IUUC-Tre-122028	Trichoderma reesei	53.57	2.00e-42	165.00
IUUC-Tvi-122637	Trichoderma virens	52.86	2.00e-42	165.00
IUUC-Tae-122793	Triticum aestivum	59.32	8.00e-93	332.00
IUUC-Tme-126962	Tuber melanosporum	51.75	1.00e-44	172.00
IUUC-Tbe-127743	Tupaia belangeri	62.50	1.00e-51	196.00
IUUC-Ttr-129193	Tursiops truncatus	62.50	1.00e-51	196.00
IUUC-Vpa-130404	Vicugna pacos	62.50	1.00e-51	196.00
IUUC-Xtr-131832	Xenopus tropicalis	60.28	4.00e-51	194.00
IUUC-Zma-134887	Zea mays	59.05	3.00e-95	340.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence