iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002457

Ensembl Protein ID

ERN17673

UniProt Accession

U5DB99; U5DB99_AMBTC

Genbank Protein ID

ERN17673.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392312

Gene Name

AMTR_s00059p00197160

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00059p00197160	ERN17673	ERN17673

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-33	113.7	218	255
UBD/Beta-Prp	2.30e-52	178.5	218	435

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v+cl++  d +ll sGs+D+t+kvW+++++++l 
   Q: 218  HYDAVSCLSLnEDhGLLYSGSWDKTLKVWRISDCRCLE 255
           7899******8556********************9986 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dlstgkcvhtlk....ghedsvlslsfs 103
           h + ++c+   +d  ll +gs+d+t+kvw++++  +l+s+  h+++v++v    dg +  tgs D+t+kvw  +ls   + h++     ++e  v++l+++
   Q: 218  HYDAVSCLSLNEDHGLLYSGSWDKTLKVWRISDCRCLESINAHDDAVNSVVAGFDG-LVFTGSADGTVKVWrrELSGKGTRHVFLqallKQECAVTALAVN 317
           556788899999*******************************************9.**************8888855555554444459999******** PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsng.......... 192
           p  ++l  Gs+d  ++ w+ e++     +l+gh+++v c+++ +   l+ sG++D+++ +W+    +  +l  l+g h ++v+++++++++          
   Q: 318  PAASVLYCGSSDGLVNFWEREKRLSHGGVLRGHKQAVLCLATAG--PLVLSGGADKAICVWKRegGQHMCLSILSG-HMGPVKCIAMEPDReagsaasngk 415
           *99***************7777766666*************999..9**************995567779****99.*********888888889999887 PP
   S: 193  kelvsgsldgtvklwdlqtg 212
             + sgsld++vk+w ++++
   Q: 416  WIVYSGSLDKSVKVWKVSEQ 435
           88899**********99854 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MREERGTLTL TESGKARGKL SNLMHSDPNI SSMNNEDEFA RDSNASTASP SYYSDRNRIS 60
AEGSPFNMSP WHQTSPYTKS PWTQASPVIP FADDSFPANG LIGSLVREEG HIYSLAAAGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGGAAG AGAGGGGAAC ACTAACGCTC ACAGAGTCGG GTAAAGCTCG AGGAAAGCTC 60
TCAAACTTGA TGCACTCAGA CCCAAACATA TCCTCCATGA ACAACGAAGA CGAATTCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006909	Arabidopsis thaliana	63.98	1.00e-161	561.00
IUUC-Bdi-014024	Brachypodium distachyon	58.41	2.00e-139	487.00
IUUC-Bol-015603	Brassica oleracea	66.49	1.00e-132	464.00
IUUC-Bra-017186	Brassica rapa	65.71	7.00e-162	562.00
IUUC-Gma-043481	Glycine max	64.37	9.00e-159	551.00
IUUC-Hvu-047445	Hordeum vulgare	61.03	1.00e-138	485.00
IUUC-Lpe-051623	Leersia perrieri	59.27	2.00e-131	461.00
IUUC-Mtr-057641	Medicago truncatula	65.31	3.00e-159	553.00
IUUC-Mac-065108	Musa acuminata	52.17	9.00e-111	392.00
IUUC-Oba-075783	Oryza barthii	60.14	8.00e-139	485.00
IUUC-Obr-076198	Oryza brachyantha	59.60	5.00e-139	486.00
IUUC-Ogl-077280	Oryza glaberrima	60.14	8.00e-139	485.00
IUUC-Ogu-078924	Oryza glumaepatula	60.14	6.00e-140	489.00
IUUC-Oin-079931	Oryza indica	60.14	7.00e-139	486.00
IUUC-Olo-080744	Oryza longistaminata	62.87	6.00e-118	416.00
IUUC-Ome-081447	Oryza meridionalis	55.46	5.00e-104	370.00
IUUC-Oni-082948	Oryza nivara	60.14	7.00e-139	486.00
IUUC-Opu-083881	Oryza punctata	60.14	9.00e-139	485.00
IUUC-Oru-084999	Oryza rufipogon	60.14	7.00e-139	486.00
IUUC-Osa-085749	Oryza sativa	60.14	7.00e-139	486.00
IUUC-Ppa-095534	Physcomitrella patens	45.83	4.00e-78	283.00
IUUC-Pop-099212	Populus trichocarpa	69.32	6.00e-172	595.00
IUUC-Ppe-101858	Prunus persica	67.86	2.00e-167	580.00
IUUC-Smo-108849	Selaginella moellendorffii	39.89	2.00e-57	215.00
IUUC-Sit-109859	Setaria italica	59.15	3.00e-129	453.00
IUUC-Sly-111122	Solanum lycopersicum	63.43	5.00e-154	536.00
IUUC-Stu-112606	Solanum tuberosum	64.89	7.00e-159	552.00
IUUC-Sbi-114260	Sorghum bicolor	62.78	1.00e-136	478.00
IUUC-Tca-121208	Theobroma cacao	66.14	3.00e-171	593.00
IUUC-Tae-123171	Triticum aestivum	44.60	3.00e-106	377.00
IUUC-Tur-126539	Triticum urartu	57.93	7.00e-93	332.00
IUUC-Vvi-131118	Vitis vinifera	65.65	6.00e-174	602.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence