iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135370

Ensembl Protein ID

Zm00001d033304_T001

UniProt Accession

A0A1D6KXL6; A0A1D6KXL6_MAIZE

Genbank Protein ID

ONM07193.1

Protein Name

Nucleotide binding protein

Genbank Nucleotide ID

CM007647

Gene Name

ZEAMMB73_Zm00001d033304

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d033304	Zm00001d033304_T001	Zm00001d033304_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-27	94.3	385	428
UBD/Beta-Prp	1.20e-43	151.4	90	368

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.........sdtl.....lvsGsdDgtikvWDlrt 32
           gHt++v c+a          +        + sGs Dg++kvW+l++
   Q: 385  GHTGPVKCVAVaadedcydaD--GerrfvVYSGSLDGSVKVWRLSE 428
           8*********99976665542..045666799***********976 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls....................... 82
           ++    +++l tg +++ ++vw+ ++   l+ +   ++ v+a+    dg  + tg++D+ ++vw  +                       
   Q: 90   LAA--AGDVLYTGTDSENVRVWRDRR--ELAGFRTGSGLVKAIVVAADG-RIFTGHQDGKVRVWRADaadpavhrrvgslpplgdllvss 174
           444..7999*************9988..6689****************9.9*************5555577799**************** PP
   S: 83   ................tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGs 156
                            +  v ++ +h+d v sls+++    l s+s+drt + w ++ + cle     hd++vn+v+  ++g l+ +Gs
   Q: 175  vnpssyvrsprggrgrGRRRVAVWLRHSDAVSSLSLDEGAGLLYSASWDRTFKAWRVSDYRCLE-SVPAHDDAVNTVAAAGFGGLVLTGS 263
           ***************99999999999************88************************.9999********************* PP
   S: 157  lDrtvrlWdl......ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.....tgecvrtlnghtdnvksvrfspnde 235
           +D+tv++W+       +t  +l++   + +++v+ ++  ++ + +  gs dg v+ w        + +    l gh   v+++++s  + 
   Q: 264  ADGTVKVWRRreaaadRTSHVLQRVLREGDGAVTAIAACPEARAVYVGSSDGLVTCWRWGldvdaQPTHAGVLAGHGMGVLCLAVS--GR 351
           **********9999997777776665559*****************************999999988889****************..** PP
   S: 236  rlvsgssDgsiriW..d 250
            +vsgs+Dg++ +W  d
   Q: 352  VVVSGSADGTLCVWrrD 368
           **************442 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MGNRKKLVHF LRVDPAAAAA ASALSSPTSF SSFSDDDGYS SSSFSSSSPS RYSPPKSPWA 60
RLPGLGGADD AAATGLIASL VKEDGKVYSL AAAGDVLYTG TDSENVRVWR DRRELAGFRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCAACCTC GCAAGCTAGC TAGCTACTAC CACTCATGCC CGCCTCCTAC GCTCTGCTCC 60
CTACTCCTCC CCTCCCTTTC GGCTCCCGAT CCCTTCCCGC GCGCGCACGT CGTCCTTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002457	Amborella trichopoda	53.80	5.00e-107	380.00
IUUC-Ath-006988	Arabidopsis thaliana	50.26	1.00e-102	366.00
IUUC-Bdi-014167	Brachypodium distachyon	45.21	9.00e-69	253.00
IUUC-Bol-016061	Brassica oleracea	51.21	4.00e-92	330.00
IUUC-Bra-017125	Brassica rapa	50.56	9.00e-103	366.00
IUUC-Gma-043117	Glycine max	49.46	9.00e-98	350.00
IUUC-Hvu-047558	Hordeum vulgare	70.03	8.00e-102	362.00
IUUC-Lpe-051648	Leersia perrieri	64.84	1.00e-103	369.00
IUUC-Mtr-057793	Medicago truncatula	52.38	3.00e-100	358.00
IUUC-Mac-065547	Musa acuminata	45.88	2.00e-67	249.00
IUUC-Obr-076198	Oryza brachyantha	52.03	1.00e-89	322.00
IUUC-Ogl-077354	Oryza glaberrima	67.80	6.00e-130	457.00
IUUC-Ogu-078749	Oryza glumaepatula	67.15	8.00e-130	456.00
IUUC-Olo-080744	Oryza longistaminata	53.04	3.00e-74	271.00
IUUC-Ome-081447	Oryza meridionalis	67.65	2.00e-127	448.00
IUUC-Oni-082121	Oryza nivara	67.80	6.00e-130	457.00
IUUC-Opu-083562	Oryza punctata	66.59	2.00e-132	464.00
IUUC-Oru-084714	Oryza rufipogon	67.80	6.00e-130	457.00
IUUC-Ppa-095765	Physcomitrella patens	40.46	4.00e-64	238.00
IUUC-Pop-099113	Populus trichocarpa	54.44	2.00e-107	382.00
IUUC-Ppe-101355	Prunus persica	53.46	2.00e-104	372.00
IUUC-Smo-108953	Selaginella moellendorffii	34.85	2.00e-50	192.00
IUUC-Sit-110073	Setaria italica	78.19	1.00e-162	565.00
IUUC-Sly-111508	Solanum lycopersicum	50.79	8.00e-106	376.00
IUUC-Stu-112114	Solanum tuberosum	51.05	1.00e-107	382.00
IUUC-Sbi-114287	Sorghum bicolor	82.97	4.00e-150	523.00
IUUC-Tca-121487	Theobroma cacao	51.73	8.00e-108	383.00
IUUC-Tae-124756	Triticum aestivum	68.14	6.00e-130	456.00
IUUC-Tur-126539	Triticum urartu	58.65	5.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence