iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d033503	Zm00001d033503_T001	Zm00001d033503_T001
Zm00001d033503	Zm00001d033503_T002	Zm00001d033503_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.60e-08	35.2	261	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl....qkw..pglknssskefrCPlCr 46
           C+iCl+ +++ p+ l+CgH+f++ C       +  ++  +s+ +e++CP+Cr
   Q: 261  CPICLDTLFN-PYALSCGHLFCKACAcgaaS-VyiFQGVKSAPPEAKCPVCR 310
           **********.**************554432.146666699**********8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MECLTSSTLY GYSSLSFLFP ADKMKFGATY EEYLRAERDK FLGQCSHVEY KRLKKVLKKC 60
RVGRSLQADG TNGDEQQEGR DESSNICECN SCTLCDEMFF TELNKEASEI AGCFRSRVQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCAAGAGAA GGCGGCCACA GCCAGACTAG CAGATAGAGA GGCGGAGCCG CGGAGGCCAG 60
CATATCTCCC TCGTTTTGGT TTGCGCCCAA GCAAGCGCGT CACGCGAGCA CCGCCGCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033326--BAH1
IPR004331--SPX_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51382--SPX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000827	Aegilops tauschii	80.41	2.00e-145	508.00
IUUC-Atr-003086	Amborella trichopoda	56.94	7.00e-109	386.00
IUUC-Aly-006118	Arabidopsis lyrata	53.80	7.00e-93	333.00
IUUC-Ath-007603	Arabidopsis thaliana	41.43	4.00e-67	247.00
IUUC-Bdi-014689	Brachypodium distachyon	83.53	1.00e-151	528.00
IUUC-Bol-016417	Brassica oleracea	39.43	1.00e-64	239.00
IUUC-Bra-017786	Brassica rapa	44.96	4.00e-65	241.00
IUUC-Gga-040463	Gallus gallus	43.10	3.00e-06	45.80
IUUC-Gma-042739	Glycine max	52.48	9.00e-105	372.00
IUUC-Hvu-047712	Hordeum vulgare	40.70	1.00e-60	226.00
IUUC-Lpe-051499	Leersia perrieri	82.32	7.00e-157	545.00
IUUC-Mtr-057657	Medicago truncatula	53.35	3.00e-106	377.00
IUUC-Mvi-060294	Microbotryum violaceum	32.10	1.00e-05	43.90
IUUC-Mac-065655	Musa acuminata	66.37	5.00e-133	466.00
IUUC-Oba-075404	Oryza barthii	83.04	6.00e-155	539.00
IUUC-Obr-076671	Oryza brachyantha	80.12	2.00e-152	531.00
IUUC-Ogl-076954	Oryza glaberrima	83.04	6.00e-155	539.00
IUUC-Ogu-078560	Oryza glumaepatula	82.61	5.00e-157	546.00
IUUC-Oin-079323	Oryza indica	83.33	1.00e-155	541.00
IUUC-Olo-081014	Oryza longistaminata	83.04	9.00e-157	545.00
IUUC-Ome-082016	Oryza meridionalis	35.62	5.00e-45	174.00
IUUC-Oni-082375	Oryza nivara	83.09	2.00e-155	541.00
IUUC-Opu-084051	Oryza punctata	33.14	1.00e-40	159.00
IUUC-Oru-085144	Oryza rufipogon	83.38	1.00e-155	542.00
IUUC-Osa-085862	Oryza sativa	83.33	1.00e-155	541.00
IUUC-Ppa-095647	Physcomitrella patens	37.57	2.00e-65	241.00
IUUC-Pop-099213	Populus trichocarpa	59.04	1.00e-97	348.00
IUUC-Ppe-102082	Prunus persica	57.44	1.00e-105	375.00
IUUC-Smo-109536	Selaginella moellendorffii	45.71	5.00e-85	306.00
IUUC-Sit-110739	Setaria italica	90.35	1.00e-166	578.00
IUUC-Sly-111157	Solanum lycopersicum	54.78	1.00e-106	379.00
IUUC-Stu-112383	Solanum tuberosum	54.91	6.00e-107	380.00
IUUC-Sbi-113846	Sorghum bicolor	83.48	1.00e-100	357.00
IUUC-Tgu-116476	Taeniopygia guttata	40.00	1.00e-05	43.90
IUUC-Tca-121172	Theobroma cacao	56.85	6.00e-115	406.00
IUUC-Tae-125064	Triticum aestivum	79.83	5.00e-148	516.00
IUUC-Tur-126362	Triticum urartu	80.70	2.00e-145	507.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence