• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Zma-135565
Ensembl Protein ID Zm00001d034054_T002
UniProt Accession A0A1D6L506; A0A1D6L506_MAIZE
Genbank Protein ID ONM09440.1
Protein Name Cleavage stimulation factor subunit 50
Genbank Nucleotide ID CM007647
Gene Name ZEAMMB73_Zm00001d034054
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Zm00001d034054 Zm00001d034054_T007 Zm00001d034054_T007
Zm00001d034054 Zm00001d034054_T006 Zm00001d034054_T006
Zm00001d034054 Zm00001d034054_T002 Zm00001d034054_T002
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.00e-29 103.2 116 148
UBD/Beta-Prp 2.30e-50 173.5 114 389
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H++  +c++f +d +++++Gs D +ik +++ +
   Q: 116  HKNAARCVKFsPDgKYFATGSADTSIKFFEVAK 148
           99999******999**************99865 PP
   

   UBD/Beta-Prp
   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..............lrslsgheaevtavkfspdgkilvtgseDrtikvwdls 82
           ++hk+  +cvkfspd++++atgs+d +ik ++v + k               +r++++h++++++++f+p+++il+++++D ti+ +d+s
   Q: 114  SDHKNAARCVKFSPDGKYFATGSADTSIKFFEVAKIKQtmvgdskdgparpvVRTFYDHTQAINDLDFHPESPILISAAKDSTIRFFDFS 203
           689999*****************************9999*************************************************** PP
   S: 83   .........................tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvh 146
                                     ++ ++   + +++v+s+ f+p gd+l++G+++ +++++d++t +c+ +   +  ++ +n v+++
   Q: 204  ktnarkafrviqvvnsskpiylyimLNSSFVNAGQDTHNVRSVCFHPCGDYLLAGTDHPVAHLYDINTFTCYLSaNAQDSSSPINQVRYS 293
           ***99*99999999988888888884444444446**************************************94455566789****** PP
   S: 147  pdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls.fdsngkelvsgsldgtvklwdlqtgecvrtlng.htdnvksvrfs.pn 233
           ++g+l+v++s+D+ +r+Wd  +++++r   g+h +s    + f+++ ++++s+++d++vklw++ tg+ v+++ g  ++++++ +++ + 
   Q: 294  CTGSLYVTASKDGSLRIWDGVSAECVRPIIGAHGSSEAISAiFTKDERYVLSCGKDSRVKLWEVGTGRLVKQYAGaIRRQFRCQAVFnET 383
           ******************************988877664446*******************************99656777777777244 PP
   S: 234  derlvs 239
           +e+++s
   Q: 384  EEFVLS 389
           444444 PP
   
Organism Zea mays
Protein Sequence
(Fasta)
MNEAVQEAKL LRQVNALIVA HLRSQNLGQA AAAVAAATMT PISAAESVPA NHLLRLVAKG 60
LAAEHGGGDA ASAFDSAGFG VAVQPPGSSA VDFSIQDVKG SSKSFPKHEV KHVSDHKNAA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Zma-135565|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACTGTTGTCA TTTCATGAGA CGTTACTCGG GATGCACTTG TAACGGGATA GTGTAGTAGC 60
AAGCATAGGA GTAAGGAGTT TTGCTAGTCT TCTTCAGCTT CAGTAGTTCA GTCCAATCAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Zma-135565|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002163 Ailuropoda melanoleuca 37.25 6.00e-76 277.00
IUUC-Atr-002687 Amborella trichopoda 54.34 2.00e-149 521.00
IUUC-Apl-003438 Anas platyrhynchos 37.25 1.00e-76 279.00
IUUC-Aca-005178 Anolis carolinensis 37.01 3.00e-76 278.00
IUUC-Aly-005791 Arabidopsis lyrata 57.08 2.00e-151 528.00
IUUC-Ath-006689 Arabidopsis thaliana 57.87 2.00e-152 531.00
IUUC-Ame-011217 Astyanax mexicanus 40.20 3.00e-64 237.00
IUUC-Bta-012619 Bos taurus 37.25 4.00e-76 277.00
IUUC-Bdi-014515 Brachypodium distachyon 74.39 0.00e+00 649.00
IUUC-Bra-017450 Brassica rapa 51.77 1.00e-136 479.00
IUUC-Cel-018151 Caenorhabditis elegans 38.32 8.00e-65 240.00
IUUC-Cja-019304 Callithrix jacchus 37.25 3.00e-76 278.00
IUUC-Cfa-020208 Canis familiaris 37.25 6.00e-76 277.00
IUUC-Cpo-022245 Cavia porcellus 37.25 6.00e-76 277.00
IUUC-Csa-023066 Chlorocebus sabaeus 37.25 3.00e-76 278.00
IUUC-Cho-024770 Choloepus hoffmanni 38.71 2.00e-74 272.00
IUUC-Cin-025621 Ciona intestinalis 34.74 4.00e-63 234.00
IUUC-Csv-026071 Ciona savignyi 38.99 1.00e-71 263.00
IUUC-Dre-028254 Danio rerio 36.52 3.00e-73 268.00
IUUC-Dno-029903 Dasypus novemcinctus 37.25 6.00e-76 277.00
IUUC-Dor-030423 Dipodomys ordii 37.25 6.00e-76 277.00
IUUC-Dme-031993 Drosophila melanogaster 36.92 4.00e-64 238.00
IUUC-Eca-033316 Equus caballus 37.25 6.00e-76 277.00
IUUC-Eeu-035001 Erinaceus europaeus 37.01 1.00e-74 273.00
IUUC-Fca-036447 Felis catus 37.25 6.00e-76 277.00
IUUC-Fal-037601 Ficedula albicollis 37.25 1.00e-76 279.00
IUUC-Gmo-038531 Gadus morhua 35.61 1.00e-68 253.00
IUUC-Gga-040869 Gallus gallus 37.25 2.00e-76 278.00
IUUC-Gac-042380 Gasterosteus aculeatus 37.80 2.00e-73 268.00
IUUC-Gma-043478 Glycine max 62.28 5.00e-167 580.00
IUUC-Ggo-045302 Gorilla gorilla 37.25 3.00e-76 278.00
IUUC-Hsa-045678 Homo sapiens 37.25 3.00e-76 278.00
IUUC-Hvu-047301 Hordeum vulgare 76.12 0.00e+00 659.00
IUUC-Itr-048259 Ictidomys tridecemlineatus 37.25 6.00e-76 277.00
IUUC-Lch-050319 Latimeria chalumnae 37.01 9.00e-76 276.00
IUUC-Lpe-051440 Leersia perrieri 62.26 3.00e-171 594.00
IUUC-Loc-052035 Lepisosteus oculatus 37.75 3.00e-76 278.00
IUUC-Laf-054275 Loxodonta africana 37.25 6.00e-76 277.00
IUUC-Mcc-055857 Macaca mulatta 38.20 2.00e-53 202.00
IUUC-Mtr-058667 Medicago truncatula 59.24 7.00e-156 542.00
IUUC-Mga-059710 Meleagris gallopavo 37.25 2.00e-76 278.00
IUUC-Mmr-060604 Microcebus murinus 37.25 6.00e-76 277.00
IUUC-Mdo-062953 Monodelphis domestica 37.25 4.00e-76 278.00
IUUC-Mmu-064292 Mus musculus 37.01 9.00e-76 276.00
IUUC-Mac-064568 Musa acuminata 67.04 3.00e-148 516.00
IUUC-Mpu-066294 Mustela putorius furo 45.07 1.00e-52 200.00
IUUC-Mlu-067279 Myotis lucifugus 37.41 5.00e-78 284.00
IUUC-Nle-069322 Nomascus leucogenys 37.25 3.00e-76 278.00
IUUC-Opr-070580 Ochotona princeps 37.25 6.00e-76 277.00
IUUC-Ont-072554 Oreochromis niloticus 37.50 2.00e-75 275.00
IUUC-Oan-072856 Ornithorhynchus anatinus 37.50 2.00e-76 279.00
IUUC-Ocu-074150 Oryctolagus cuniculus 36.67 4.00e-59 221.00
IUUC-Oba-075585 Oryza barthii 73.75 0.00e+00 642.00
IUUC-Obr-076069 Oryza brachyantha 75.27 0.00e+00 645.00
IUUC-Ogl-077045 Oryza glaberrima 77.24 0.00e+00 685.00
IUUC-Ogu-078697 Oryza glumaepatula 77.25 0.00e+00 663.00
IUUC-Oin-080119 Oryza indica 77.24 0.00e+00 685.00
IUUC-Olo-081093 Oryza longistaminata 50.70 9.00e-74 271.00
IUUC-Ome-081718 Oryza meridionalis 55.58 7.00e-123 434.00
IUUC-Oni-082072 Oryza nivara 73.75 0.00e+00 642.00
IUUC-Opu-084080 Oryza punctata 51.87 5.00e-110 390.00
IUUC-Oru-085070 Oryza rufipogon 73.90 0.00e+00 640.00
IUUC-Osa-086149 Oryza sativa 77.24 0.00e+00 685.00
IUUC-Ola-086697 Oryzias latipes 37.25 1.00e-74 273.00
IUUC-Oga-088697 Otolemur garnettii 37.25 6.00e-76 277.00
IUUC-Oar-089774 Ovis aries 37.25 9.00e-76 276.00
IUUC-Ptr-090924 Pan troglodytes 37.25 3.00e-76 278.00
IUUC-Pan-092373 Papio anubis 37.25 5.00e-76 278.00
IUUC-Psi-094001 Pelodiscus sinensis 37.25 4.00e-76 278.00
IUUC-Pma-094274 Petromyzon marinus 36.36 2.00e-68 252.00
IUUC-Ppa-095562 Physcomitrella patens 58.80 1.00e-151 529.00
IUUC-Pfo-097235 Poecilia formosa 37.25 5.00e-75 274.00
IUUC-Pab-098608 Pongo abelii 37.25 3.00e-76 278.00
IUUC-Pca-100268 Procavia capensis 37.25 4.00e-76 277.00
IUUC-Ppe-101425 Prunus persica 61.17 3.00e-161 561.00
IUUC-Pva-103183 Pteropus vampyrus 37.25 6.00e-76 277.00
IUUC-Rno-105097 Rattus norvegicus 37.01 9.00e-76 276.00
IUUC-Sha-107642 Sarcophilus harrisii 37.25 4.00e-76 278.00
IUUC-Smo-108680 Selaginella moellendorffii 55.23 1.00e-132 466.00
IUUC-Sit-110471 Setaria italica 85.46 0.00e+00 749.00
IUUC-Sly-111143 Solanum lycopersicum 53.93 8.00e-73 266.00
IUUC-Stu-111926 Solanum tuberosum 71.34 2.00e-66 243.00
IUUC-Sar-112947 Sorex araneus 38.36 2.00e-57 215.00
IUUC-Sbi-113769 Sorghum bicolor 88.81 0.00e+00 760.00
IUUC-Ssc-115736 Sus scrofa 37.25 6.00e-76 277.00
IUUC-Tgu-117457 Taeniopygia guttata 37.25 1.00e-76 279.00
IUUC-Tru-117760 Takifugu rubripes 37.99 5.00e-76 277.00
IUUC-Tsy-118943 Tarsius syrichta 37.01 2.00e-72 265.00
IUUC-Tni-120081 Tetraodon nigroviridis 37.75 9.00e-76 276.00
IUUC-Tca-121190 Theobroma cacao 62.50 1.00e-166 578.00
IUUC-Tae-125535 Triticum aestivum 74.28 0.00e+00 637.00
IUUC-Tur-126329 Triticum urartu 76.97 4.00e-171 594.00
IUUC-Tbe-127878 Tupaia belangeri 37.01 1.00e-74 272.00
IUUC-Ttr-128985 Tursiops truncatus 37.25 6.00e-76 277.00
IUUC-Vpa-130147 Vicugna pacos 37.25 9.00e-76 276.00
IUUC-Vvi-130935 Vitis vinifera 62.42 2.00e-165 575.00
IUUC-Xtr-132482 Xenopus tropicalis 37.25 3.00e-76 278.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved