iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d034081	Zm00001d034081_T001	Zm00001d034081_T001
Zm00001d034081	Zm00001d034081_T002	Zm00001d034081_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-12	47.9	92	124

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           H+d   c++f   ++ + +Gs D+++k+WD +t
   Q: 92   HEDALACIEFssLTGQIMTGSLDKKLKLWDSKT 124
           999999****763399**************665 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MARRSLAVDA TAGAASRVRF APTSNNLLVS SWDSGLRLYD ADEGTLRVNV ESEAAFLDCC 60
FEDESAAFAC GSDGSVRRYD FHSGSQDTVG LHEDALACIE FSSLTGQIMT GSLDKKLKLW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCTCCCCGC TCCAGCGCCC CTGCAGTTCT CGCTCCACTG ACAGCTCGCC GAGGGGCCGC 60
GCCGCGCTCG AGACCCGTCG ATGGCGAGGC GGAGCCTGGC GGTCGACGCA ACCGCAGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001094	Aegilops tauschii	61.35	1.00e-102	365.00
IUUC-Atr-002604	Amborella trichopoda	43.62	2.00e-67	248.00
IUUC-Aly-006482	Arabidopsis lyrata	40.61	3.00e-62	231.00
IUUC-Ath-007619	Arabidopsis thaliana	40.96	1.00e-62	232.00
IUUC-Bdi-014018	Brachypodium distachyon	63.79	5.00e-111	393.00
IUUC-Bol-016156	Brassica oleracea	39.51	2.00e-62	231.00
IUUC-Bra-017094	Brassica rapa	40.36	5.00e-62	231.00
IUUC-Gma-043687	Glycine max	44.64	4.00e-70	257.00
IUUC-Lpe-051057	Leersia perrieri	62.37	6.00e-108	383.00
IUUC-Mtr-058179	Medicago truncatula	45.17	6.00e-72	263.00
IUUC-Mac-064581	Musa acuminata	50.69	9.00e-83	299.00
IUUC-Oba-075790	Oryza barthii	63.48	8.00e-112	395.00
IUUC-Obr-076040	Oryza brachyantha	64.08	7.00e-112	396.00
IUUC-Ogu-079013	Oryza glumaepatula	56.55	4.00e-106	377.00
IUUC-Oin-080034	Oryza indica	63.48	2.00e-111	395.00
IUUC-Olo-080445	Oryza longistaminata	54.85	6.00e-92	330.00
IUUC-Ome-081933	Oryza meridionalis	56.55	2.00e-107	381.00
IUUC-Oni-082305	Oryza nivara	63.48	5.00e-112	396.00
IUUC-Opu-083254	Oryza punctata	57.34	2.00e-99	355.00
IUUC-Oru-085161	Oryza rufipogon	63.48	5.00e-112	396.00
IUUC-Pop-099762	Populus trichocarpa	46.58	1.00e-69	256.00
IUUC-Ppe-101222	Prunus persica	45.45	1.00e-42	166.00
IUUC-Sit-110260	Setaria italica	70.32	2.00e-120	424.00
IUUC-Stu-112000	Solanum tuberosum	43.75	2.00e-65	242.00
IUUC-Sbi-114097	Sorghum bicolor	87.38	3.00e-160	556.00
IUUC-Tca-121403	Theobroma cacao	47.70	9.00e-74	270.00
IUUC-Tae-124814	Triticum aestivum	64.47	1.00e-106	378.00
IUUC-Tur-126104	Triticum urartu	64.21	6.00e-110	389.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence