iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d034487	Zm00001d034487_T001	Zm00001d034487_T001
Zm00001d034487	Zm00001d034487_T002	Zm00001d034487_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-07	31.7	185	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 13   d.tllvsGsdDgtikvWDlrtgvl 35
           d ++lvs+s Dg+ ++W++++g +
   Q: 185  DsKFLVSSSTDGSARIWNIDEGSP 208
           5599**************988865 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAGTGGEGAV GKVTCAAWIR RRDDYGGPPG VSRLLVAFGR RSTASSPPLV DLLEFDAKAS 60
ALASESEPLA SASPARVTVG EDAADTPRAI AVHPGGRELV CATAKGCRLF NLVYKDFGVH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGGGA CCGGCGGCGA GGGTGCGGTC GGGAAGGTGA CTTGCGCGGC ATGGATACGG 60
CGGCGGGACG ACTACGGCGG GCCGCCCGGC GTCTCCCGTC TTCTCGTGGC GTTCGGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	61.89	3.00e-123	434.00
IUUC-Aml-001671	Ailuropoda melanoleuca	25.48	1.00e-06	47.00
IUUC-Atr-002477	Amborella trichopoda	53.04	5.00e-105	373.00
IUUC-Aly-005479	Arabidopsis lyrata	33.55	4.00e-38	151.00
IUUC-Ath-006922	Arabidopsis thaliana	33.33	2.00e-35	142.00
IUUC-Bta-012386	Bos taurus	25.24	5.00e-08	52.00
IUUC-Bdi-014908	Brachypodium distachyon	72.94	4.00e-151	526.00
IUUC-Bra-016660	Brassica rapa	36.59	9.00e-43	167.00
IUUC-Cel-018480	Caenorhabditis elegans	28.31	5.00e-09	55.10
IUUC-Cja-018998	Callithrix jacchus	25.09	5.00e-10	58.50
IUUC-Cfa-020666	Canis familiaris	26.21	9.00e-09	54.30
IUUC-Cpo-022030	Cavia porcellus	26.62	1.00e-09	57.40
IUUC-Csa-023521	Chlorocebus sabaeus	26.21	4.00e-08	52.00
IUUC-Cin-025431	Ciona intestinalis	26.12	8.00e-10	57.80
IUUC-Dre-027832	Danio rerio	23.94	4.00e-10	58.50
IUUC-Dno-028989	Dasypus novemcinctus	25.24	3.00e-09	55.80
IUUC-Ete-032290	Echinops telfairi	25.00	2.00e-08	52.80
IUUC-Eca-033917	Equus caballus	26.34	3.00e-08	52.40
IUUC-Fca-036323	Felis catus	26.21	1.00e-08	53.90
IUUC-Gmo-038693	Gadus morhua	24.35	1.00e-09	57.40
IUUC-Gga-040702	Gallus gallus	26.61	6.00e-10	58.20
IUUC-Gac-042635	Gasterosteus aculeatus	24.44	2.00e-07	49.70
IUUC-Gma-043653	Glycine max	53.31	3.00e-111	394.00
IUUC-Ggo-044648	Gorilla gorilla	26.34	3.00e-09	55.80
IUUC-Hsa-046003	Homo sapiens	26.34	3.00e-09	55.80
IUUC-Itr-048613	Ictidomys tridecemlineatus	24.91	6.00e-09	54.70
IUUC-Lch-049473	Latimeria chalumnae	24.71	2.00e-09	56.20
IUUC-Lpe-051586	Leersia perrieri	32.67	1.00e-39	156.00
IUUC-Loc-052177	Lepisosteus oculatus	23.77	2.00e-12	66.60
IUUC-Laf-054366	Loxodonta africana	25.73	1.00e-08	53.50
IUUC-Mcc-055775	Macaca mulatta	26.34	5.00e-09	55.10
IUUC-Mtr-058623	Medicago truncatula	50.83	7.00e-105	373.00
IUUC-Mmr-061126	Microcebus murinus	27.18	3.00e-10	59.30
IUUC-Mdo-062928	Monodelphis domestica	25.74	9.00e-07	47.80
IUUC-Mmu-064083	Mus musculus	25.26	1.00e-09	57.40
IUUC-Mac-064955	Musa acuminata	36.15	7.00e-49	187.00
IUUC-Mpu-066857	Mustela putorius furo	23.88	3.00e-09	55.50
IUUC-Mlu-067891	Myotis lucifugus	25.24	3.00e-07	48.90
IUUC-Nle-070030	Nomascus leucogenys	25.98	7.00e-09	54.70
IUUC-Opr-070864	Ochotona princeps	25.85	9.00e-08	50.80
IUUC-Ont-072204	Oreochromis niloticus	24.89	3.00e-09	55.80
IUUC-Ocu-074217	Oryctolagus cuniculus	26.22	2.00e-07	49.70
IUUC-Oba-075552	Oryza barthii	69.36	9.00e-148	515.00
IUUC-Obr-076826	Oryza brachyantha	32.88	2.00e-42	166.00
IUUC-Ogl-077345	Oryza glaberrima	69.36	1.00e-147	515.00
IUUC-Ogu-078334	Oryza glumaepatula	69.36	9.00e-148	515.00
IUUC-Oin-079600	Oryza indica	69.36	1.00e-147	515.00
IUUC-Olo-080918	Oryza longistaminata	68.87	9.00e-148	515.00
IUUC-Ome-081986	Oryza meridionalis	69.64	7.00e-148	516.00
IUUC-Oni-082430	Oryza nivara	69.68	4.00e-126	443.00
IUUC-Opu-083902	Oryza punctata	71.07	2.00e-148	517.00
IUUC-Oru-084937	Oryza rufipogon	69.68	8.00e-126	442.00
IUUC-Osa-085881	Oryza sativa	69.36	1.00e-147	515.00
IUUC-Ola-087223	Oryzias latipes	23.00	1.00e-08	53.90
IUUC-Oga-088417	Otolemur garnettii	26.99	1.00e-08	53.50
IUUC-Oar-090435	Ovis aries	25.24	4.00e-08	52.00
IUUC-Pan-092527	Papio anubis	26.21	4.00e-08	52.00
IUUC-Pma-094156	Petromyzon marinus	23.66	3.00e-08	52.40
IUUC-Ppa-095590	Physcomitrella patens	38.60	4.00e-58	218.00
IUUC-Pfo-097488	Poecilia formosa	25.35	8.00e-09	54.70
IUUC-Pab-097720	Pongo abelii	26.34	2.00e-09	56.20
IUUC-Pop-099307	Populus trichocarpa	53.80	1.00e-108	385.00
IUUC-Pca-100288	Procavia capensis	27.17	7.00e-07	47.80
IUUC-Ppe-101362	Prunus persica	52.01	1.00e-103	369.00
IUUC-Pva-103192	Pteropus vampyrus	25.94	6.00e-10	58.20
IUUC-Rno-106123	Rattus norvegicus	25.26	5.00e-10	58.50
IUUC-Sha-107169	Sarcophilus harrisii	26.01	3.00e-07	49.30
IUUC-Smo-108754	Selaginella moellendorffii	40.51	1.00e-54	205.00
IUUC-Sly-110920	Solanum lycopersicum	50.95	2.00e-95	342.00
IUUC-Stu-112065	Solanum tuberosum	51.94	4.00e-96	344.00
IUUC-Sar-113218	Sorex araneus	28.26	2.00e-07	48.50
IUUC-Ssc-115282	Sus scrofa	25.24	3.00e-08	52.40
IUUC-Tru-117866	Takifugu rubripes	27.68	3.00e-10	59.30
IUUC-Tca-121608	Theobroma cacao	53.39	6.00e-112	396.00
IUUC-Tae-123425	Triticum aestivum	71.58	5.00e-158	549.00
IUUC-Tur-126597	Triticum urartu	66.92	2.00e-100	357.00
IUUC-Ttr-128585	Tursiops truncatus	25.73	2.00e-08	53.50
IUUC-Vvi-131686	Vitis vinifera	58.80	5.00e-105	373.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence