iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135006

Ensembl Protein ID

Zm00001d034862_T003

UniProt Accession

A0A1D6LC04; A0A1D6LC04_MAIZE

Genbank Protein ID

ONM11634.1; ONM11635.1

Protein Name

Transducin family protein / WD-40 repeat family protein

Genbank Nucleotide ID

CM007647; CM007647

Gene Name

ZEAMMB73_Zm00001d034862

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d034862	Zm00001d034862_T006	Zm00001d034862_T006
Zm00001d034862	Zm00001d034862_T001	Zm00001d034862_T001
Zm00001d034862	Zm00001d034862_T005	Zm00001d034862_T005
Zm00001d034862	Zm00001d034862_T008	Zm00001d034862_T008
Zm00001d034862	Zm00001d034862_T003	Zm00001d034862_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-13	50.6	488	511

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   af.sd.tllvsGsdDgtikvWDlr 31
           ++ +d ++++sGs D +i+++D+r
   Q: 488  SWsPDgWYMSSGSADPVIHIFDIR 511
           599999****************87 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MGDPPTLKRP KLEKADDDST YCPRPSSNGA APVRTPGATA AIGAAPGDDV EEEDDIAEEA 60
VIALIAHRER DVERCKLKLL HYQSLLDTAE MKLEEAHSRL ARFRDRKPPP TRSEPKPPTP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCCCTCTTC GCTGCACCCA ATCCCTTGTC CTGTCCTCGA ACCGTCCGCC GCCGCGTTCA 60
ACATGGGCGA CCCGCCGACG CTCAAGAGGC CCAAGCTCGA GAAGGCCGAC GACGACTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000679	Aegilops tauschii	68.35	5.00e-161	560.00
IUUC-Atr-002878	Amborella trichopoda	48.32	4.00e-127	447.00
IUUC-Aly-006473	Arabidopsis lyrata	49.40	2.00e-135	475.00
IUUC-Ath-006806	Arabidopsis thaliana	49.80	4.00e-134	471.00
IUUC-Bdi-014216	Brachypodium distachyon	63.78	0.00e+00	646.00
IUUC-Bol-015463	Brassica oleracea	49.50	2.00e-135	475.00
IUUC-Bra-017074	Brassica rapa	59.62	9.00e-134	469.00
IUUC-Gma-042665	Glycine max	51.54	8.00e-146	509.00
IUUC-Hvu-047292	Hordeum vulgare	74.83	2.00e-133	468.00
IUUC-Lpe-051627	Leersia perrieri	68.58	0.00e+00	686.00
IUUC-Mtr-058789	Medicago truncatula	51.88	3.00e-138	484.00
IUUC-Mac-065472	Musa acuminata	57.12	2.00e-162	565.00
IUUC-Oba-074995	Oryza barthii	74.50	8.00e-178	616.00
IUUC-Obr-076006	Oryza brachyantha	73.48	0.00e+00	738.00
IUUC-Ogl-077176	Oryza glaberrima	72.24	0.00e+00	701.00
IUUC-Ogu-078267	Oryza glumaepatula	73.62	0.00e+00	711.00
IUUC-Oin-079742	Oryza indica	74.84	0.00e+00	631.00
IUUC-Olo-080890	Oryza longistaminata	77.91	5.00e-161	560.00
IUUC-Ome-081454	Oryza meridionalis	72.73	0.00e+00	699.00
IUUC-Oni-083009	Oryza nivara	69.76	0.00e+00	688.00
IUUC-Opu-083781	Oryza punctata	82.61	3.00e-175	607.00
IUUC-Oru-084517	Oryza rufipogon	69.76	0.00e+00	688.00
IUUC-Osa-085484	Oryza sativa	81.05	4.00e-180	623.00
IUUC-Ppa-095859	Physcomitrella patens	41.58	8.00e-96	343.00
IUUC-Pop-099647	Populus trichocarpa	47.87	4.00e-140	491.00
IUUC-Ppe-101833	Prunus persica	50.19	1.00e-144	506.00
IUUC-Smo-109600	Selaginella moellendorffii	37.85	5.00e-43	167.00
IUUC-Sit-109887	Setaria italica	87.69	0.00e+00	697.00
IUUC-Sly-111601	Solanum lycopersicum	49.73	8.00e-146	509.00
IUUC-Stu-112708	Solanum tuberosum	60.66	4.00e-128	451.00
IUUC-Sbi-114727	Sorghum bicolor	86.54	0.00e+00	895.00
IUUC-Tca-121644	Theobroma cacao	50.80	4.00e-138	484.00
IUUC-Tae-123256	Triticum aestivum	62.41	3.00e-177	614.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence