iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135588

Ensembl Protein ID

Zm00001d034929_T008

UniProt Accession

A0A1D6LCJ6; A0A1D6LCJ6_MAIZE

Genbank Protein ID

ONM11780.1; ONM11790.1; ONM11796.1

Protein Name

Leunig-related3

Genbank Nucleotide ID

CM007647; CM007647; CM007647

Gene Name

ZEAMMB73_Zm00001d034929

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d034929	Zm00001d034929_T018	Zm00001d034929_T018
Zm00001d034929	Zm00001d034929_T001	Zm00001d034929_T001
Zm00001d034929	Zm00001d034929_T013	Zm00001d034929_T013
Zm00001d034929	Zm00001d034929_T008	Zm00001d034929_T008
Zm00001d034929	Zm00001d034929_T014	Zm00001d034929_T014
Zm00001d034929	Zm00001d034929_T012	Zm00001d034929_T012
Zm00001d034929	Zm00001d034929_T004	Zm00001d034929_T004
Zm00001d034929	Zm00001d034929_T003	Zm00001d034929_T003
Zm00001d034929	Zm00001d034929_T017	Zm00001d034929_T017
Zm00001d034929	Zm00001d034929_T006	Zm00001d034929_T006
Zm00001d034929	Zm00001d034929_T007	Zm00001d034929_T007
Zm00001d034929	Zm00001d034929_T016	Zm00001d034929_T016
Zm00001d034929	Zm00001d034929_T002	Zm00001d034929_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-24	86.9	642	679
UBD/Beta-Prp	2.80e-40	140.4	607	753

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+++v+ +++  ++ +l+s s D t+kvW++++gv+++
   Q: 642  GHNSEVNFVSWdeNGEYLASVSQD-TVKVWSVSSGVCIH 679
           8**********9777*********.************97 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp 104
           v f p + +l++  + +++ ++dv++++ l +  +gh++ev+ v+++++g++l+++s+D t+kvw++s+g c+h l+ + ++  s++f+p
   Q: 607  VRFEPRSGQLLAVAAGSMVNIFDVEKQSSLPCPpKGHNSEVNFVSWDENGEYLASVSQD-TVKVWSVSSGVCIHELRSNGNQYQSCTFHP 695
           678666666666667*****************99************************9.89**************************** PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
              k+++ +  +t+++w l+ +q +  + + h+g++  ++ +p++ +++s+s Dr+v+lW
   Q: 696  RYPKVLIVGGYQTLELWSLSDNQRI--PIQAHEGLIAALAHSPFTGMIASASHDRCVKLW 753
           66555555559**************..5999***************************** PP

Organism

Zea mays

Protein Sequence
(Fasta)

MARTNWEADK MLDVYIYDYL VKRNLQATAK AFIAEGKVAT DPVAIDAPGG FLFEWWSIFW 60
DIFHSSTAKA SSTSTAAAFI DHTAKQQQPI GAGTGAPPPH PLHDSREHQM RLQQLLHQHN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCAGAGGCA GACACAGCCA GCCGGCCGCT GCTGTGCCTC GCTGCTGTGC CTGCCTGCCG 60
GCTGCCGCCA TCCATCCTTT TTCCCTTCCT CCCCTCACCC CCTCGTCGGA ATCGGAACGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000895	Aegilops tauschii	67.46	0.00e+00	915.00
IUUC-Bdi-014357	Brachypodium distachyon	71.32	0.00e+00	994.00
IUUC-Oba-075852	Oryza barthii	67.21	0.00e+00	889.00
IUUC-Ogl-077588	Oryza glaberrima	73.92	0.00e+00	1001.00
IUUC-Oin-079375	Oryza indica	70.66	0.00e+00	991.00
IUUC-Olo-080403	Oryza longistaminata	70.88	2.00e-136	479.00
IUUC-Ome-081919	Oryza meridionalis	67.51	0.00e+00	915.00
IUUC-Oni-082308	Oryza nivara	68.65	0.00e+00	934.00
IUUC-Opu-083437	Oryza punctata	71.41	0.00e+00	989.00
IUUC-Oru-085080	Oryza rufipogon	68.26	0.00e+00	918.00
IUUC-Osa-085544	Oryza sativa	73.92	0.00e+00	1001.00
IUUC-Sit-110244	Setaria italica	84.64	0.00e+00	1159.00
IUUC-Sbi-114483	Sorghum bicolor	89.82	0.00e+00	1190.00
IUUC-Tae-125279	Triticum aestivum	68.48	0.00e+00	934.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence