iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d035534	Zm00001d035534_T001	Zm00001d035534_T001
Zm00001d035534	Zm00001d035534_T002	Zm00001d035534_T002
Zm00001d035534	Zm00001d035534_T003	Zm00001d035534_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-08	35.9	420	450

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           Ht +v ++++ ++  ++vs s D t+kvW+l 
   Q: 420  HTKGVDSVCWdPTgEYVVSVSED-TVKVWSLN 450
           9999*******888*********.*****985 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MMEGGSRADG QNPNQLRLFT CTGNLLHRAH GCARWAQGGI VVLATVYGPK PGTVRGRTPE 60
KASIEAVWKP RTGQIDTPLF PSSSFCPTAV RVTGSLKWRV VFVGRQDREY EMTLKRTLQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGGAGG GAGGTAGCCG CGCGGATGGG CAGAACCCGA ACCAGCTCCG GCTGTTCACC 60
TGCACCGGGA ACTTGCTCCA CCGCGCCCAC GGCTGCGCGC GGTGGGCGCA GGGCGGAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0269--Exonuclease
KW-0378--Hydrolase
KW-0540--Nuclease
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR015633--E2F
IPR001247--ExoRNase_PH_dom1
IPR002469--Peptidase_S9B_N
IPR027408--PNPase/RNase_PH_dom
IPR020568--Ribosomal_S5_D2-typ_fold
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF01138--RNase_PH

SMART

SM00320--WD40

Gene Ontology

GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence