iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058167

Ensembl Protein ID

KEH24882

UniProt Accession

A0A072U5F9; A0A072U5F9_MEDTR

Genbank Protein ID

KEH24882.1

Protein Name

RING-H2 finger protein ATL47

Genbank Nucleotide ID

CM001222

Gene Name

MTR_6g007737

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_6g007737	KEH24882	KEH24882

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.90e-07	31.3	159	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  kd +++lp C H+fh +C+  w         + +CPlCr
   Q: 159  CAVCLCEFteKDKLRLLPmCSHAFHISCIDTW------LLSNSTCPLCR 201
           ********98666*******************......888889****8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSETMYPKLL FEHTHLRMSL INHHQIYQKD GYFINFPPPS SQSSSSSSTT STASGTTAPS 60
SSSSTKISPA VLFIIVVLAV LFFISGLLHL LVRFLIKHPS SSSSSNRQHH NEISTSDALQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCTTTATTG CGAGTGAGAT TGAAACTATT TCTGTTTCTT TTTGTCATCC CTTACCTCTC 60
TCACTTTGGG AACTGCTTCC TTCCCACTTT CACAGTTTTT GGATTCTTTC CTTCTTACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_6g007737

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000392	Aegilops tauschii	55.67	1.00e-55	208.00
IUUC-Aml-001193	Ailuropoda melanoleuca	48.75	1.00e-17	84.00
IUUC-Apl-003969	Anas platyrhynchos	43.48	1.00e-15	77.40
IUUC-Aca-005377	Anolis carolinensis	45.88	2.00e-15	77.00
IUUC-Aly-005849	Arabidopsis lyrata	60.86	7.00e-100	356.00
IUUC-Ath-006995	Arabidopsis thaliana	60.57	4.00e-100	357.00
IUUC-Ame-011097	Astyanax mexicanus	43.02	5.00e-14	72.40
IUUC-Bta-013113	Bos taurus	43.48	2.00e-15	77.00
IUUC-Bdi-014382	Brachypodium distachyon	52.08	4.00e-63	234.00
IUUC-Bol-015358	Brassica oleracea	58.26	1.00e-90	325.00
IUUC-Bra-016690	Brassica rapa	62.66	7.00e-89	319.00
IUUC-Cja-018860	Callithrix jacchus	43.48	2.00e-15	77.00
IUUC-Cfa-020202	Canis familiaris	46.91	2.00e-16	80.10
IUUC-Cpo-022394	Cavia porcellus	44.32	2.00e-14	73.60
IUUC-Csa-023242	Chlorocebus sabaeus	43.48	2.00e-15	76.60
IUUC-Dno-029606	Dasypus novemcinctus	43.48	1.00e-15	77.40
IUUC-Dme-032187	Drosophila melanogaster	37.93	2.00e-16	81.30
IUUC-Ete-033099	Echinops telfairi	44.57	5.00e-16	79.00
IUUC-Eca-033976	Equus caballus	43.48	1.00e-15	77.40
IUUC-Eeu-034964	Erinaceus europaeus	43.48	2.00e-15	77.00
IUUC-Fca-035572	Felis catus	48.65	3.00e-16	79.70
IUUC-Fal-036996	Ficedula albicollis	43.48	1.00e-15	77.80
IUUC-Gga-040816	Gallus gallus	43.48	1.00e-15	77.40
IUUC-Gac-041767	Gasterosteus aculeatus	44.19	3.00e-14	73.20
IUUC-Gma-044353	Glycine max	68.84	7.00e-107	379.00
IUUC-Ggo-044754	Gorilla gorilla	43.48	2.00e-15	77.00
IUUC-Hsa-045776	Homo sapiens	43.48	2.00e-15	77.00
IUUC-Hvu-047144	Hordeum vulgare	51.33	2.00e-62	231.00
IUUC-Itr-048044	Ictidomys tridecemlineatus	43.48	2.00e-15	77.00
IUUC-Lch-050178	Latimeria chalumnae	45.35	2.00e-15	76.60
IUUC-Lpe-051339	Leersia perrieri	51.90	4.00e-70	258.00
IUUC-Loc-052124	Lepisosteus oculatus	44.19	3.00e-14	73.20
IUUC-Laf-054328	Loxodonta africana	43.48	2.00e-15	77.00
IUUC-Mcc-054739	Macaca mulatta	43.48	2.00e-15	77.00
IUUC-Meu-056359	Macropus eugenii	44.57	4.00e-16	79.00
IUUC-Mga-059838	Meleagris gallopavo	43.48	1.00e-15	77.40
IUUC-Mmr-060608	Microcebus murinus	43.48	2.00e-15	77.40
IUUC-Mdo-061961	Monodelphis domestica	44.57	6.00e-16	78.60
IUUC-Mmu-064278	Mus musculus	43.48	1.00e-15	77.40
IUUC-Mpu-065838	Mustela putorius furo	49.37	1.00e-17	84.30
IUUC-Mlu-066930	Myotis lucifugus	43.48	1.00e-15	77.40
IUUC-Nle-069311	Nomascus leucogenys	45.88	3.00e-15	76.60
IUUC-Oan-073036	Ornithorhynchus anatinus	43.48	2.00e-15	77.00
IUUC-Ocu-073795	Oryctolagus cuniculus	43.48	2.00e-15	77.00
IUUC-Oba-075878	Oryza barthii	51.21	5.00e-72	264.00
IUUC-Obr-076120	Oryza brachyantha	52.08	7.00e-72	263.00
IUUC-Ogl-077906	Oryza glaberrima	50.87	3.00e-71	261.00
IUUC-Ogu-078031	Oryza glumaepatula	51.21	6.00e-72	263.00
IUUC-Oin-080065	Oryza indica	50.75	8.00e-65	240.00
IUUC-Olo-080996	Oryza longistaminata	51.21	5.00e-72	264.00
IUUC-Ome-081784	Oryza meridionalis	51.21	6.00e-72	263.00
IUUC-Oni-082697	Oryza nivara	51.21	5.00e-72	264.00
IUUC-Opu-083782	Oryza punctata	51.39	4.00e-71	261.00
IUUC-Oru-084352	Oryza rufipogon	51.21	5.00e-72	264.00
IUUC-Osa-085627	Oryza sativa	51.21	5.00e-72	264.00
IUUC-Ola-087461	Oryzias latipes	49.28	4.00e-14	72.80
IUUC-Oga-088022	Otolemur garnettii	45.88	2.00e-15	77.00
IUUC-Oar-089348	Ovis aries	43.48	2.00e-15	77.00
IUUC-Ptr-090604	Pan troglodytes	43.48	2.00e-15	77.00
IUUC-Pan-092322	Papio anubis	43.48	2.00e-15	77.00
IUUC-Psi-093936	Pelodiscus sinensis	43.48	3.00e-15	75.90
IUUC-Pab-098671	Pongo abelii	43.48	2.00e-15	77.00
IUUC-Pop-099808	Populus trichocarpa	70.76	3.00e-103	367.00
IUUC-Pca-100263	Procavia capensis	43.96	1.00e-15	77.80
IUUC-Ppe-101995	Prunus persica	68.88	1.00e-90	325.00
IUUC-Pva-102709	Pteropus vampyrus	42.39	2.00e-14	73.60
IUUC-Rno-105759	Rattus norvegicus	43.48	1.00e-15	77.40
IUUC-Sha-106792	Sarcophilus harrisii	43.48	1.00e-15	77.40
IUUC-Sit-109828	Setaria italica	51.59	3.00e-66	244.00
IUUC-Sly-111152	Solanum lycopersicum	65.25	2.00e-82	298.00
IUUC-Stu-112833	Solanum tuberosum	63.09	3.00e-85	308.00
IUUC-Ssc-115738	Sus scrofa	43.48	2.00e-15	77.40
IUUC-Tgu-117205	Taeniopygia guttata	43.48	1.00e-15	77.40
IUUC-Tca-121741	Theobroma cacao	68.13	5.00e-118	416.00
IUUC-Tae-124691	Triticum aestivum	51.91	4.00e-63	234.00
IUUC-Tbe-127543	Tupaia belangeri	43.48	1.00e-15	77.40
IUUC-Vpa-130058	Vicugna pacos	43.48	1.00e-15	77.40
IUUC-Vvi-131093	Vitis vinifera	69.74	1.00e-94	339.00
IUUC-Xtr-132663	Xenopus tropicalis	45.88	3.00e-15	76.30
IUUC-Xma-133076	Xiphophorus maculatus	44.19	3.00e-14	73.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence