iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006263

Ensembl Protein ID

fgenesh2_kg.3__709__AT3G06880.1

UniProt Accession

D7L607; D7L607_ARALL

Genbank Protein ID

EFH60872.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348715

Gene Name

ARALYDRAFT_478008

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__709__AT3G06880.1	fgenesh2_kg.3__709__AT3G06880.1	fgenesh2_kg.3__709__AT3G06880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-09	38.5	892	929

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd..tllvsGsdDgtikvWDlrtgvllk 37
           H++ vtc+++s+    ++sGs D+ti+vW + +g+l++
   Q: 892  HKSTVTCFSLSEagESVLSGSADKTIRVWQIVKGKLEC 929
           9*********444588**************99998876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAYLSSSQSS FISCNENSSL DSILVSINDY ILGVISDPEA WISLKQKCIT LLSIEEDNTL 60
FDDFSSEHSA LSNLYWGIDS IETSIHPECS EEKTSRLRNS ERMLQMPALL DEQGTTTSGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTACC TTTCATCTTC TCAATCGAGT TTTATCTCAT GTAATGAGAA TTCATCTCTT 60
GACTCGATTC TAGTTTCGAT CAACGACTAC ATTCTTGGCG TGATATCAGA CCCCGAAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0007165--P:signal transduction

KEGG

aly:ARALYDRAFT_478008

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000535	Aegilops tauschii	40.45	1.00e-154	540.00
IUUC-Atr-002498	Amborella trichopoda	37.47	2.00e-128	453.00
IUUC-Ath-006648	Arabidopsis thaliana	74.28	0.00e+00	1758.00
IUUC-Bdi-014493	Brachypodium distachyon	41.13	1.00e-157	550.00
IUUC-Bol-016092	Brassica oleracea	68.26	0.00e+00	1494.00
IUUC-Bra-016701	Brassica rapa	65.98	0.00e+00	1472.00
IUUC-Gma-043902	Glycine max	42.58	0.00e+00	844.00
IUUC-Hvu-047807	Hordeum vulgare	42.86	1.00e-95	342.00
IUUC-Lpe-051180	Leersia perrieri	40.58	1.00e-156	546.00
IUUC-Mtr-057703	Medicago truncatula	46.33	0.00e+00	639.00
IUUC-Mac-064996	Musa acuminata	38.14	2.00e-157	549.00
IUUC-Oba-075721	Oryza barthii	41.09	2.00e-162	565.00
IUUC-Obr-076233	Oryza brachyantha	40.08	1.00e-159	556.00
IUUC-Ogl-077542	Oryza glaberrima	41.09	3.00e-162	565.00
IUUC-Ogu-078363	Oryza glumaepatula	37.41	3.00e-162	565.00
IUUC-Oin-079050	Oryza indica	41.09	1.00e-161	563.00
IUUC-Olo-080332	Oryza longistaminata	41.75	2.00e-164	572.00
IUUC-Ome-081772	Oryza meridionalis	41.09	2.00e-161	562.00
IUUC-Oni-082467	Oryza nivara	41.09	1.00e-161	563.00
IUUC-Opu-083132	Oryza punctata	41.47	6.00e-163	567.00
IUUC-Oru-084836	Oryza rufipogon	37.51	6.00e-164	571.00
IUUC-Osa-085493	Oryza sativa	41.21	1.00e-162	566.00
IUUC-Pop-099360	Populus trichocarpa	48.79	0.00e+00	680.00
IUUC-Ppe-102099	Prunus persica	47.14	0.00e+00	658.00
IUUC-Smo-109666	Selaginella moellendorffii	23.10	3.00e-30	127.00
IUUC-Sit-110371	Setaria italica	40.39	7.00e-165	574.00
IUUC-Sly-111793	Solanum lycopersicum	45.27	0.00e+00	628.00
IUUC-Stu-112760	Solanum tuberosum	45.53	0.00e+00	632.00
IUUC-Sbi-114833	Sorghum bicolor	40.32	3.00e-155	542.00
IUUC-Tca-121753	Theobroma cacao	47.81	0.00e+00	751.00
IUUC-Tae-124317	Triticum aestivum	40.92	3.00e-158	551.00
IUUC-Tur-126343	Triticum urartu	40.31	8.00e-155	540.00
IUUC-Vvi-130975	Vitis vinifera	41.57	0.00e+00	834.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence