iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016701

Ensembl Protein ID

Bra001223.1-P

UniProt Accession

M4CAJ4; M4CAJ4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra001223	Bra001223.1	Bra001223.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-09	37.3	1005	1042

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           H++ vtc++   ++  ++sGs D+ti++W + +g+l++
   Q: 1005 HKSAVTCFSVseTGESVLSGSADKTIRIWQIVKGKLEC 1042
           99*****999865599**************99998875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MASPPNLISC NESSDLESIQ ETVVSINDYI LSVVSNPEVW FSLKQQCISM LSIEEENTLF 60
EFSSEHSALS NLYWGIESIE ASLQPESSEE KMSRLRNSER MLQMPALLEE QGTTTSGVPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCTC CTCCAAATCT TATCTCCTGT AACGAGAGTT CTGATCTTGA ATCCATTCAG 60
GAGACTGTAG TTTCCATCAA CGACTACATT CTCAGCGTTG TATCAAACCC TGAAGTATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000535	Aegilops tauschii	50.31	0.00e+00	755.00
IUUC-Atr-002498	Amborella trichopoda	44.27	0.00e+00	654.00
IUUC-Aly-006263	Arabidopsis lyrata	70.46	0.00e+00	1592.00
IUUC-Ath-006648	Arabidopsis thaliana	76.77	0.00e+00	2017.00
IUUC-Bdi-014493	Brachypodium distachyon	45.12	0.00e+00	687.00
IUUC-Bol-016092	Brassica oleracea	94.92	0.00e+00	2338.00
IUUC-Gma-043902	Glycine max	46.55	0.00e+00	1053.00
IUUC-Hvu-047807	Hordeum vulgare	53.57	9.00e-132	462.00
IUUC-Lpe-051180	Leersia perrieri	48.48	0.00e+00	755.00
IUUC-Mtr-057703	Medicago truncatula	54.42	0.00e+00	870.00
IUUC-Mac-064996	Musa acuminata	49.54	0.00e+00	792.00
IUUC-Oba-075721	Oryza barthii	47.36	0.00e+00	776.00
IUUC-Obr-076233	Oryza brachyantha	48.25	0.00e+00	764.00
IUUC-Ogl-077542	Oryza glaberrima	49.18	0.00e+00	776.00
IUUC-Ogu-078363	Oryza glumaepatula	49.18	0.00e+00	771.00
IUUC-Oin-079050	Oryza indica	49.18	0.00e+00	773.00
IUUC-Olo-080332	Oryza longistaminata	46.81	0.00e+00	689.00
IUUC-Ome-081772	Oryza meridionalis	49.24	0.00e+00	773.00
IUUC-Oni-082467	Oryza nivara	49.18	0.00e+00	774.00
IUUC-Opu-083132	Oryza punctata	49.53	0.00e+00	777.00
IUUC-Oru-084836	Oryza rufipogon	49.18	0.00e+00	776.00
IUUC-Osa-085493	Oryza sativa	49.18	0.00e+00	776.00
IUUC-Pop-099360	Populus trichocarpa	58.40	0.00e+00	899.00
IUUC-Ppe-102099	Prunus persica	56.54	0.00e+00	902.00
IUUC-Smo-109666	Selaginella moellendorffii	26.08	6.00e-61	229.00
IUUC-Sit-110371	Setaria italica	49.25	0.00e+00	781.00
IUUC-Sly-111793	Solanum lycopersicum	54.84	0.00e+00	860.00
IUUC-Stu-112760	Solanum tuberosum	55.09	0.00e+00	864.00
IUUC-Sbi-114833	Sorghum bicolor	48.00	0.00e+00	734.00
IUUC-Tca-121753	Theobroma cacao	59.53	0.00e+00	991.00
IUUC-Tae-124317	Triticum aestivum	50.19	0.00e+00	752.00
IUUC-Tur-126343	Triticum urartu	50.06	0.00e+00	753.00
IUUC-Vvi-130975	Vitis vinifera	49.02	0.00e+00	1082.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence