iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076233

Ensembl Protein ID

OB05G21530.1

UniProt Accession

J3M6C9; J3M6C9_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB05G21530	OB05G21530.1	OB05G21530.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-06	28.2	895	929

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           H+  vtc+a+  +++ l+sGs D++i+vW + + +
   Q: 895  HKKAVTCFALseTGDNLLSGSADKSIRVWKMAQRK 929
           8999******8755789************987655 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MPAATGTATA MAVPPHSSIC SLIAFLHHHI RALLADRDAL LAARARCIQF GRSVSSAIPK 60
WPDFSEGGTI HSGDHEGECR ASNSNCGDHD GFAELKDFLN CDDQELQEDT KGSSDSRCLH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGCGG CGACAGGGAC GGCGACGGCA ATGGCGGTGC CGCCGCACTC CTCCATCTGC 60
TCGCTCATCG CCTTCCTGCA CCACCACATC CGCGCGCTCC TCGCCGACCG GGACGCGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000535	Aegilops tauschii	81.48	0.00e+00	1714.00
IUUC-Atr-002498	Amborella trichopoda	45.08	0.00e+00	706.00
IUUC-Aly-006263	Arabidopsis lyrata	39.67	4.00e-162	564.00
IUUC-Ath-006648	Arabidopsis thaliana	47.63	0.00e+00	804.00
IUUC-Bdi-014493	Brachypodium distachyon	79.89	0.00e+00	1665.00
IUUC-Bol-016092	Brassica oleracea	47.88	0.00e+00	784.00
IUUC-Bra-016701	Brassica rapa	49.03	0.00e+00	796.00
IUUC-Dme-031844	Drosophila melanogaster	24.85	9.00e-07	46.60
IUUC-Gma-043180	Glycine max	43.91	0.00e+00	858.00
IUUC-Hvu-047807	Hordeum vulgare	84.22	0.00e+00	768.00
IUUC-Lpe-051180	Leersia perrieri	92.19	0.00e+00	1957.00
IUUC-Mtr-057703	Medicago truncatula	51.64	0.00e+00	839.00
IUUC-Mac-064996	Musa acuminata	55.79	0.00e+00	1176.00
IUUC-Oba-075721	Oryza barthii	93.20	0.00e+00	1993.00
IUUC-Ogl-077542	Oryza glaberrima	93.29	0.00e+00	1993.00
IUUC-Ogu-078363	Oryza glumaepatula	90.73	0.00e+00	1976.00
IUUC-Oin-079050	Oryza indica	93.38	0.00e+00	2015.00
IUUC-Olo-080332	Oryza longistaminata	87.97	0.00e+00	1863.00
IUUC-Ome-081772	Oryza meridionalis	91.70	0.00e+00	1952.00
IUUC-Oni-082467	Oryza nivara	90.81	0.00e+00	1943.00
IUUC-Opu-083132	Oryza punctata	93.57	0.00e+00	1996.00
IUUC-Oru-084836	Oryza rufipogon	90.72	0.00e+00	1972.00
IUUC-Osa-085493	Oryza sativa	93.25	0.00e+00	2001.00
IUUC-Pop-099360	Populus trichocarpa	50.12	0.00e+00	804.00
IUUC-Ppe-102099	Prunus persica	49.43	0.00e+00	835.00
IUUC-Sit-110371	Setaria italica	79.29	0.00e+00	1743.00
IUUC-Sly-111793	Solanum lycopersicum	51.19	0.00e+00	838.00
IUUC-Stu-112760	Solanum tuberosum	50.78	0.00e+00	825.00
IUUC-Sbi-114833	Sorghum bicolor	79.96	0.00e+00	1559.00
IUUC-Tca-121753	Theobroma cacao	45.45	0.00e+00	897.00
IUUC-Tae-124317	Triticum aestivum	80.81	0.00e+00	1743.00
IUUC-Tur-126343	Triticum urartu	77.95	0.00e+00	1702.00
IUUC-Vvi-130975	Vitis vinifera	48.30	0.00e+00	910.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence