iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d039521	Zm00001d039521_T003	Zm00001d039521_T003
Zm00001d039521	Zm00001d039521_T002	Zm00001d039521_T002
Zm00001d039521	Zm00001d039521_T004	Zm00001d039521_T004
Zm00001d039521	Zm00001d039521_T007	Zm00001d039521_T007
Zm00001d039521	Zm00001d039521_T006	Zm00001d039521_T006

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-24	85.2	113	148
UBD/Beta-Prp	1.10e-44	154.9	190	323

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gHt+ + ++++ s+ + l sGs Dg++++WD  +g+
   Q: 113  GHTEAIGGISLpSGsNKLYSGSVDGSVRIWDCNSGK 148
           8**********9668****************98886 PP

UBD/Beta-Prp

   S: 119  rvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl....ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtv 204
           + w+++tg +l+  ++g +++v+++++ +   +l++G+ D+ ++ W+     ++ + +  l+g h+++v sls++   ++l sgsld+t+
   Q: 190  KAWNTKTGMKLR--FQGPSSLVCSMAITD--EMLFAGTGDGRIMAWRFpakeSNTEPVLILSG-HQRPVISLSISA--RRLYSGSLDKTI 272
           568888888887..888888999988888..89999999999999999554444444445566.999999999998..789999999999 PP
   S: 205  klwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
           k wdl t +cv+tl +h++ v+sv  +  de l+s+s D+++++W l  + +l
   Q: 273  KAWDLTTRQCVQTLSEHKAAVTSVLCW--DEKLLSCSLDKTVKLWTLSESGNL 323
           999999999999999999999999999..999999999999999944333222 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPISSTLATR LRTGHSSAPK PARRSPYTRP KPSGGAKASR PSPRLDPATT RPLEPSQKAV 60
RSGLGRRAEP DVPDARAAES KPKLAHGDDR PPLEEKRRCS GEGGFVFLCA LAGHTEAIGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCTCTACCC GCACCGCGCT CTTCTTCGGA TCTTTCCCTA GCCGCGCGTA CGCGAGACTA 60
GCCCTAGCCG CGCGTACGCG AGACACCAAC CACCGGCGCC GCTATGCCGA TCTCCTCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	50.43	2.00e-82	298.00
IUUC-Bdi-014959	Brachypodium distachyon	59.35	2.00e-117	415.00
IUUC-Lpe-051507	Leersia perrieri	59.67	2.00e-129	455.00
IUUC-Oba-075357	Oryza barthii	78.18	7.00e-102	362.00
IUUC-Obr-076846	Oryza brachyantha	57.63	8.00e-127	446.00
IUUC-Ogl-077192	Oryza glaberrima	78.18	1.00e-101	361.00
IUUC-Ogu-077987	Oryza glumaepatula	56.34	4.00e-120	424.00
IUUC-Oin-079320	Oryza indica	58.07	7.00e-129	453.00
IUUC-Olo-080642	Oryza longistaminata	69.93	9.00e-115	408.00
IUUC-Ome-081921	Oryza meridionalis	52.16	1.00e-108	385.00
IUUC-Oni-082030	Oryza nivara	54.87	1.00e-124	439.00
IUUC-Opu-083302	Oryza punctata	56.02	5.00e-125	440.00
IUUC-Oru-085210	Oryza rufipogon	56.56	9.00e-129	452.00
IUUC-Sit-110042	Setaria italica	65.19	1.00e-142	498.00
IUUC-Sbi-114302	Sorghum bicolor	73.83	2.00e-173	601.00
IUUC-Tae-123685	Triticum aestivum	59.65	1.00e-120	426.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence