iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d039534	Zm00001d039534_T002	Zm00001d039534_T002
Zm00001d039534	Zm00001d039534_T001	Zm00001d039534_T001
Zm00001d039534	Zm00001d039534_T003	Zm00001d039534_T003
Zm00001d039534	Zm00001d039534_T004	Zm00001d039534_T004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-22	79.1	249	273

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf..sdtllvsGsdDgtikvWDlr 31
           ++a+  s  llvs+s D ++kvWD+ 
   Q: 249  SVAWhkS-SLLVSCSKDSKVKVWDTV 273
           799*853.89**************75 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSAPPVRTLA DLDGDVLAHC AGYLGARDVA SLAMACRPLR AAAYCDAVWY RLFRDQWPFE 60
KVPCDALGLR ELYIHRHTEI HQMKFGDPIS ALYYLDPAGT TPSHVMMDRN SIWFCQGPAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGCGCTGC CGGGAACTGT GGCCACCGGG CCCGCCGCCA GACCCCCGGT GTTCTCCTCG 60
CCGGCGATGT CGGCGCCGCC TGTGCGTACG CTCGCCGACC TTGATGGCGA CGTGCTGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

zma:100275548

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003129	Amborella trichopoda	43.28	8.00e-96	343.00
IUUC-Bdi-014621	Brachypodium distachyon	73.73	0.00e+00	696.00
IUUC-Gma-043867	Glycine max	42.37	2.00e-103	369.00
IUUC-Hvu-047817	Hordeum vulgare	73.20	0.00e+00	719.00
IUUC-Lpe-051161	Leersia perrieri	74.19	0.00e+00	697.00
IUUC-Mtr-057899	Medicago truncatula	47.21	1.00e-74	273.00
IUUC-Mac-065373	Musa acuminata	51.13	1.00e-105	375.00
IUUC-Oba-075705	Oryza barthii	75.94	0.00e+00	733.00
IUUC-Obr-076913	Oryza brachyantha	76.79	0.00e+00	737.00
IUUC-Ogl-077871	Oryza glaberrima	76.15	0.00e+00	733.00
IUUC-Ogu-078128	Oryza glumaepatula	76.15	0.00e+00	732.00
IUUC-Oin-079947	Oryza indica	75.94	0.00e+00	729.00
IUUC-Olo-080246	Oryza longistaminata	73.68	2.00e-166	577.00
IUUC-Ome-081308	Oryza meridionalis	75.31	0.00e+00	734.00
IUUC-Oni-082542	Oryza nivara	75.94	0.00e+00	729.00
IUUC-Opu-083600	Oryza punctata	75.94	0.00e+00	723.00
IUUC-Oru-084880	Oryza rufipogon	76.15	0.00e+00	730.00
IUUC-Osa-085335	Oryza sativa	74.87	2.00e-165	575.00
IUUC-Ppa-095334	Physcomitrella patens	34.22	2.00e-66	246.00
IUUC-Pop-099428	Populus trichocarpa	48.52	1.00e-83	302.00
IUUC-Ppe-101795	Prunus persica	46.99	1.00e-89	322.00
IUUC-Smo-108689	Selaginella moellendorffii	34.32	2.00e-53	203.00
IUUC-Sit-110574	Setaria italica	82.50	0.00e+00	756.00
IUUC-Sly-111776	Solanum lycopersicum	41.83	9.00e-90	323.00
IUUC-Stu-112081	Solanum tuberosum	45.02	4.00e-56	210.00
IUUC-Sbi-114123	Sorghum bicolor	90.15	0.00e+00	861.00
IUUC-Tca-120973	Theobroma cacao	44.61	1.00e-115	409.00
IUUC-Tae-123831	Triticum aestivum	74.12	0.00e+00	719.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence