iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027382

Ensembl Protein ID

ENSDARP00000089117.2

UniProt Accession

F1QKC0; F1QKC0_DANRE

Genbank Protein ID

ENSDARP00000089117

Protein Name

Smu-1 suppressor of mec-8 and unc-52 homolog a (C. elegans)

Genbank Nucleotide ID

FP103010

Gene Name

smu1a; smu1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000002538.7	ENSDART00000098346.3	ENSDARP00000089117.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-33	112.3	265	300
UBD/Beta-Prp	4.90e-53	181.2	213	512

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           d v c++f  d  +l++G+ Dg+ikvW + +g +l+
   Q: 265  DAVLCMSFsRDtEMLATGAQDGKIKVWKIQSGQCLR 300
           6799*****777********************9986 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheae.......vtavkfspdgkilvtgseDrtikvwdlstgkcvht 89
           +ks + c  fspd+++l+tgs dg i+vw++ttgk  + l ++ ++        v +++fs+d+++l+tg++D+ ikvw +++g+c++ 
   Q: 213  QKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLkYQAQDNfmmmddaVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLRR 301
           678899******************************666644444446666666*********************************** PP
   S: 90   lk.ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltg 177
           ++ +h++ v++lsfs+++  ++s+s d+tir+  l++g+cl+  ++gh+++vn +++ pdg   +s+s D+tv++W++kt ++  t+++
   Q: 302  YErAHSKGVTCLSFSKDSTQILSASFDQTIRIHGLKSGKCLK-EFRGHSSFVNEATLTPDGHHAISASSDGTVKVWNMKTTECTSTFKS 389
           *989**************************************.********************************************77 PP
   S: 178  ghtdsvysls......fdsngkelvsgsldgtvklwdlqtgecvrtlnght...dnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
             t++ + ++      + +n +++v + + +tv + ++q g++vr++   +     + +  +sp++e+++++++D +++++ + +g+l 
   Q: 390  LGTSAGTDITvnnvilLPKNPEHFVVCNRSNTVVIMNMQ-GQIVRSFSSGKregGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLE 477
           777777777766677777788*****************5.668888887665665556678889************************* PP
   S: 258  ktlqlhnssvisvavlsfgdnvlvlgsedskvniwk 293
           +tl+ h++ vi +a+ ++ +n + + sed+ +++wk
   Q: 478  RTLTVHEKDVIGIAH-HPHQNLIGTYSEDGLLKLWK 512
           ***************.*******************8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSIEIESADV IRLIMQYLKE NSLHRTLAML QEETTVSLNT VDSIESFVAD INSGHWDTVL 60
QAIQSLKLPD KTLIDLYEQV VLELIELREL GAARSLLRQT DPMIMLKQTQ PERYIHLENL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCCAGTAG GTGGAAGAAA CGCACAAACG CTGCTTTTCC ATCCGCCATT TATCTGAAAA 60
CAGAAGAAGA CGACGTGTGT TGTCCCTGAC GTGTTGTGTG TCTTCAGTTT TTTCTGCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000857	Aegilops tauschii	60.27	2.00e-48	184.00
IUUC-Aml-001330	Ailuropoda melanoleuca	95.71	0.00e+00	1034.00
IUUC-Atr-002570	Amborella trichopoda	66.02	0.00e+00	721.00
IUUC-Apl-003826	Anas platyrhynchos	95.34	0.00e+00	991.00
IUUC-Aca-005183	Anolis carolinensis	95.34	0.00e+00	1029.00
IUUC-Aly-005632	Arabidopsis lyrata	63.55	0.00e+00	709.00
IUUC-Ath-007219	Arabidopsis thaliana	63.55	0.00e+00	704.00
IUUC-Ame-011374	Astyanax mexicanus	96.49	0.00e+00	1043.00
IUUC-Bta-012890	Bos taurus	95.71	0.00e+00	1034.00
IUUC-Bdi-014061	Brachypodium distachyon	64.26	0.00e+00	721.00
IUUC-Bol-016332	Brassica oleracea	64.45	0.00e+00	714.00
IUUC-Bra-017612	Brassica rapa	64.33	0.00e+00	714.00
IUUC-Cel-018238	Caenorhabditis elegans	63.01	0.00e+00	687.00
IUUC-Cja-019336	Callithrix jacchus	95.71	0.00e+00	1034.00
IUUC-Cfa-021108	Canis familiaris	95.71	0.00e+00	1033.00
IUUC-Cpo-022052	Cavia porcellus	95.71	0.00e+00	1034.00
IUUC-Cre-022595	Chlamydomonas reinhardtii	59.57	0.00e+00	652.00
IUUC-Csa-023488	Chlorocebus sabaeus	95.71	0.00e+00	1034.00
IUUC-Cho-025010	Choloepus hoffmanni	86.16	0.00e+00	911.00
IUUC-Cin-025251	Ciona intestinalis	81.52	0.00e+00	897.00
IUUC-Csv-026092	Ciona savignyi	74.95	0.00e+00	820.00
IUUC-Dno-029007	Dasypus novemcinctus	95.91	0.00e+00	1035.00
IUUC-Dor-030180	Dipodomys ordii	82.56	0.00e+00	668.00
IUUC-Dme-031762	Drosophila melanogaster	77.78	0.00e+00	869.00
IUUC-Ete-032933	Echinops telfairi	95.12	0.00e+00	858.00
IUUC-Eca-033864	Equus caballus	95.83	0.00e+00	1018.00
IUUC-Eeu-034635	Erinaceus europaeus	85.82	0.00e+00	759.00
IUUC-Fca-036119	Felis catus	95.71	0.00e+00	1034.00
IUUC-Fal-037396	Ficedula albicollis	95.79	0.00e+00	1008.00
IUUC-Gmo-038962	Gadus morhua	94.54	0.00e+00	1024.00
IUUC-Gga-040134	Gallus gallus	95.71	0.00e+00	1033.00
IUUC-Gac-041630	Gasterosteus aculeatus	94.54	0.00e+00	1024.00
IUUC-Gma-043928	Glycine max	65.62	0.00e+00	728.00
IUUC-Ggo-045061	Gorilla gorilla	95.34	0.00e+00	1029.00
IUUC-Hsa-046215	Homo sapiens	95.71	0.00e+00	1034.00
IUUC-Hvu-047799	Hordeum vulgare	66.11	5.00e-147	513.00
IUUC-Itr-048826	Ictidomys tridecemlineatus	95.71	0.00e+00	1034.00
IUUC-Lch-050209	Latimeria chalumnae	89.69	0.00e+00	952.00
IUUC-Lpe-050740	Leersia perrieri	64.65	0.00e+00	718.00
IUUC-Loc-052739	Lepisosteus oculatus	88.05	0.00e+00	942.00
IUUC-Laf-053895	Loxodonta africana	95.53	0.00e+00	1030.00
IUUC-Mcc-055183	Macaca mulatta	95.71	0.00e+00	1034.00
IUUC-Mtr-057730	Medicago truncatula	64.26	0.00e+00	702.00
IUUC-Mga-059222	Meleagris gallopavo	95.45	0.00e+00	849.00
IUUC-Mmr-061749	Microcebus murinus	94.74	0.00e+00	1020.00
IUUC-Mdo-062920	Monodelphis domestica	95.32	0.00e+00	1032.00
IUUC-Mmu-063228	Mus musculus	95.71	0.00e+00	1034.00
IUUC-Mac-065084	Musa acuminata	66.02	0.00e+00	733.00
IUUC-Mpu-066162	Mustela putorius furo	95.71	0.00e+00	1034.00
IUUC-Mlu-067471	Myotis lucifugus	94.93	0.00e+00	1028.00
IUUC-Nle-070129	Nomascus leucogenys	95.71	0.00e+00	1034.00
IUUC-Opr-071176	Ochotona princeps	95.83	0.00e+00	1018.00
IUUC-Ont-071830	Oreochromis niloticus	95.52	0.00e+00	1035.00
IUUC-Oan-072778	Ornithorhynchus anatinus	95.71	0.00e+00	1035.00
IUUC-Ocu-074570	Oryctolagus cuniculus	95.71	0.00e+00	1034.00
IUUC-Oba-075507	Oryza barthii	64.65	0.00e+00	719.00
IUUC-Obr-076672	Oryza brachyantha	65.04	0.00e+00	725.00
IUUC-Ogl-077110	Oryza glaberrima	64.65	0.00e+00	719.00
IUUC-Ogu-077976	Oryza glumaepatula	64.65	0.00e+00	719.00
IUUC-Oin-079525	Oryza indica	64.65	0.00e+00	719.00
IUUC-Olo-080391	Oryza longistaminata	63.00	0.00e+00	712.00
IUUC-Oni-082778	Oryza nivara	64.65	0.00e+00	719.00
IUUC-Opu-083710	Oryza punctata	64.84	0.00e+00	721.00
IUUC-Oru-084250	Oryza rufipogon	64.65	0.00e+00	719.00
IUUC-Osa-085363	Oryza sativa	64.65	0.00e+00	719.00
IUUC-Ola-087092	Oryzias latipes	96.10	0.00e+00	1038.00
IUUC-Olu-087753	Ostreococcus lucimarinus	49.81	1.00e-138	486.00
IUUC-Oga-088278	Otolemur garnettii	87.26	0.00e+00	921.00
IUUC-Oar-089664	Ovis aries	95.16	0.00e+00	1029.00
IUUC-Ptr-090991	Pan troglodytes	95.71	0.00e+00	1034.00
IUUC-Pan-092697	Papio anubis	95.71	0.00e+00	1034.00
IUUC-Psi-093204	Pelodiscus sinensis	95.79	0.00e+00	1009.00
IUUC-Ppa-095319	Physcomitrella patens	65.23	0.00e+00	728.00
IUUC-Pfo-096988	Poecilia formosa	95.52	0.00e+00	1036.00
IUUC-Pab-098288	Pongo abelii	95.71	0.00e+00	1034.00
IUUC-Pop-098787	Populus trichocarpa	65.50	0.00e+00	730.00
IUUC-Pca-100583	Procavia capensis	89.68	0.00e+00	930.00
IUUC-Ppe-101307	Prunus persica	64.45	0.00e+00	721.00
IUUC-Pva-102711	Pteropus vampyrus	95.71	0.00e+00	1034.00
IUUC-Rno-105614	Rattus norvegicus	95.71	0.00e+00	1034.00
IUUC-Sha-107017	Sarcophilus harrisii	95.52	0.00e+00	1033.00
IUUC-Smo-109547	Selaginella moellendorffii	62.57	0.00e+00	666.00
IUUC-Sit-110278	Setaria italica	64.65	0.00e+00	699.00
IUUC-Sly-111777	Solanum lycopersicum	66.60	0.00e+00	732.00
IUUC-Stu-112293	Solanum tuberosum	66.41	0.00e+00	731.00
IUUC-Sar-112955	Sorex araneus	85.99	0.00e+00	912.00
IUUC-Sbi-114802	Sorghum bicolor	64.84	0.00e+00	697.00
IUUC-Ssc-116054	Sus scrofa	95.71	0.00e+00	1034.00
IUUC-Tgu-116909	Taeniopygia guttata	94.53	0.00e+00	1021.00
IUUC-Tru-118195	Takifugu rubripes	95.32	0.00e+00	1030.00
IUUC-Tsy-119420	Tarsius syrichta	87.91	0.00e+00	932.00
IUUC-Tni-120416	Tetraodon nigroviridis	94.74	0.00e+00	1023.00
IUUC-Tca-121653	Theobroma cacao	65.11	0.00e+00	701.00
IUUC-Tae-125609	Triticum aestivum	64.06	0.00e+00	718.00
IUUC-Tur-126197	Triticum urartu	65.30	4.00e-153	534.00
IUUC-Tbe-128009	Tupaia belangeri	95.00	0.00e+00	688.00
IUUC-Ttr-128719	Tursiops truncatus	88.11	0.00e+00	938.00
IUUC-Vpa-130579	Vicugna pacos	95.32	0.00e+00	1026.00
IUUC-Vvi-131127	Vitis vinifera	66.41	0.00e+00	731.00
IUUC-Xtr-132950	Xenopus tropicalis	89.17	0.00e+00	953.00
IUUC-Xma-133537	Xiphophorus maculatus	95.52	0.00e+00	1036.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence