iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Laf-054474

UUCD1 version

UUC-LoA-00499

Ensembl Protein ID

ENSLAFP00000012036.4

UniProt Accession

G3TD41; G3TD41_LOXAF

Protein Name

Uncharacterized protein

Gene Name

GTF3C2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000014368.4	ENSLAFT00000014376.4	ENSLAFP00000012036.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-10	39.9	611	643

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           H   v+ l++   ++++lvs++ D +ik WDlr
   Q: 611  HDQAVRTLQWckaNSHFLVSAGSDRKIKFWDLR 643
           8999********8669***************97 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MDTYGVGCVA LGEAGPVGNM TVVDSPGQEV LNQLDVKASS EMTSTEASTG MLPTPLPGFA 60
DSPDKRRFPL EQESFSRLEQ QDLSSEMSKV SKPRASKPGR KRGGRTRKGP KRPQQPNPPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATACCT ACGGGGTCGG CTGTGTTGCT CTGGGGGAGG CCGGCCCCGT GGGGAACATG 60
ACTGTGGTAG ACTCTCCTGG TCAAGAAGTG CTAAACCAGC TTGATGTCAA GGCCTCTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000127--C:transcription factor TFIIIC complex
GO:0003677--F:DNA binding
GO:0006383--P:transcription from RNA polymerase III promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000875	Aegilops tauschii	27.16	1.00e-11	65.50
IUUC-Aml-001488	Ailuropoda melanoleuca	91.30	0.00e+00	1368.00
IUUC-Apl-003185	Anas platyrhynchos	61.07	0.00e+00	720.00
IUUC-Aca-005245	Anolis carolinensis	60.21	0.00e+00	663.00
IUUC-Ath-006785	Arabidopsis thaliana	23.25	2.00e-05	44.70
IUUC-Ame-010654	Astyanax mexicanus	41.49	3.00e-127	449.00
IUUC-Bta-012551	Bos taurus	87.41	0.00e+00	1243.00
IUUC-Bdi-014228	Brachypodium distachyon	32.28	4.00e-12	67.40
IUUC-Bol-015619	Brassica oleracea	27.01	2.00e-06	48.10
IUUC-Bra-017820	Brassica rapa	25.81	1.00e-06	48.50
IUUC-Cja-019727	Callithrix jacchus	90.23	0.00e+00	1277.00
IUUC-Cfa-020469	Canis familiaris	91.06	0.00e+00	1314.00
IUUC-Cpo-021854	Cavia porcellus	87.84	0.00e+00	1319.00
IUUC-Csa-023726	Chlorocebus sabaeus	90.58	0.00e+00	1308.00
IUUC-Cho-024296	Choloepus hoffmanni	93.93	1.00e-179	623.00
IUUC-Dre-028735	Danio rerio	39.07	2.00e-136	479.00
IUUC-Dno-028895	Dasypus novemcinctus	90.58	0.00e+00	1261.00
IUUC-Dor-030617	Dipodomys ordii	90.79	0.00e+00	1020.00
IUUC-Eca-033420	Equus caballus	90.58	0.00e+00	1252.00
IUUC-Eeu-035060	Erinaceus europaeus	76.01	0.00e+00	1058.00
IUUC-Fca-035603	Felis catus	90.23	0.00e+00	1287.00
IUUC-Fal-037637	Ficedula albicollis	62.42	0.00e+00	746.00
IUUC-Gga-040991	Gallus gallus	65.13	0.00e+00	743.00
IUUC-Ggo-045595	Gorilla gorilla	90.35	0.00e+00	1306.00
IUUC-Hsa-046196	Homo sapiens	90.58	0.00e+00	1307.00
IUUC-Hvu-047758	Hordeum vulgare	26.16	2.00e-11	65.50
IUUC-Itr-048222	Ictidomys tridecemlineatus	80.94	0.00e+00	1269.00
IUUC-Lch-050384	Latimeria chalumnae	46.25	2.00e-149	522.00
IUUC-Lpe-050995	Leersia perrieri	31.50	6.00e-09	56.60
IUUC-Loc-052778	Lepisosteus oculatus	48.04	0.00e+00	642.00
IUUC-Mcc-055795	Macaca mulatta	91.05	0.00e+00	1097.00
IUUC-Mga-059757	Meleagris gallopavo	78.50	2.00e-99	353.00
IUUC-Mmr-061702	Microcebus murinus	91.54	0.00e+00	1298.00
IUUC-Mdo-063012	Monodelphis domestica	71.03	0.00e+00	1006.00
IUUC-Mmu-064106	Mus musculus	83.06	0.00e+00	1304.00
IUUC-Mpu-066147	Mustela putorius furo	85.95	0.00e+00	1224.00
IUUC-Mlu-067530	Myotis lucifugus	89.27	0.00e+00	1198.00
IUUC-Nle-069278	Nomascus leucogenys	90.35	0.00e+00	1287.00
IUUC-Opr-070222	Ochotona princeps	93.50	0.00e+00	1030.00
IUUC-Ont-071367	Oreochromis niloticus	39.25	5.00e-114	405.00
IUUC-Oan-073357	Ornithorhynchus anatinus	78.69	0.00e+00	743.00
IUUC-Ocu-074887	Oryctolagus cuniculus	88.33	0.00e+00	1241.00
IUUC-Obr-076376	Oryza brachyantha	29.92	4.00e-10	60.50
IUUC-Ogl-077258	Oryza glaberrima	29.73	2.00e-09	58.90
IUUC-Ogu-078002	Oryza glumaepatula	29.73	1.00e-09	58.50
IUUC-Oin-079689	Oryza indica	29.73	2.00e-09	58.50
IUUC-Olo-080486	Oryza longistaminata	31.87	2.00e-07	51.20
IUUC-Oni-082369	Oryza nivara	29.73	2.00e-09	58.50
IUUC-Opu-083230	Oryza punctata	29.05	1.00e-09	59.30
IUUC-Osa-085403	Oryza sativa	29.73	1.00e-09	58.50
IUUC-Ola-087512	Oryzias latipes	36.79	5.00e-55	207.00
IUUC-Oga-088051	Otolemur garnettii	89.05	0.00e+00	1225.00
IUUC-Oar-090076	Ovis aries	87.05	0.00e+00	1242.00
IUUC-Ptr-091503	Pan troglodytes	89.44	0.00e+00	1234.00
IUUC-Pan-092123	Papio anubis	90.70	0.00e+00	1310.00
IUUC-Psi-094020	Pelodiscus sinensis	64.36	0.00e+00	773.00
IUUC-Pma-094395	Petromyzon marinus	42.18	4.00e-76	278.00
IUUC-Ppa-095644	Physcomitrella patens	27.00	8.00e-11	61.20
IUUC-Pfo-097023	Poecilia formosa	39.59	7.00e-114	405.00
IUUC-Pab-097532	Pongo abelii	90.35	0.00e+00	1298.00
IUUC-Pop-099342	Populus trichocarpa	25.48	2.00e-08	55.10
IUUC-Pca-100255	Procavia capensis	98.40	0.00e+00	655.00
IUUC-Ppe-101268	Prunus persica	28.70	4.00e-08	54.30
IUUC-Pva-102403	Pteropus vampyrus	91.54	0.00e+00	1263.00
IUUC-Rno-105329	Rattus norvegicus	81.41	0.00e+00	1234.00
IUUC-Sha-106857	Sarcophilus harrisii	66.93	0.00e+00	968.00
IUUC-Sit-110532	Setaria italica	31.50	1.00e-11	65.50
IUUC-Sly-110922	Solanum lycopersicum	23.47	4.00e-10	60.50
IUUC-Sar-113690	Sorex araneus	79.88	2.00e-164	572.00
IUUC-Sbi-114680	Sorghum bicolor	33.07	7.00e-13	70.10
IUUC-Tgu-117058	Taeniopygia guttata	64.56	9.00e-129	452.00
IUUC-Tru-118675	Takifugu rubripes	42.10	5.00e-125	441.00
IUUC-Tsy-119606	Tarsius syrichta	81.47	0.00e+00	881.00
IUUC-Tni-120125	Tetraodon nigroviridis	39.68	6.00e-66	244.00
IUUC-Tae-124395	Triticum aestivum	27.59	2.00e-11	65.50
IUUC-Tur-126862	Triticum urartu	26.72	1.00e-11	65.50
IUUC-Tbe-127727	Tupaia belangeri	80.87	0.00e+00	1023.00
IUUC-Ttr-128425	Tursiops truncatus	89.89	0.00e+00	1128.00
IUUC-Vpa-130050	Vicugna pacos	86.65	0.00e+00	1197.00
IUUC-Vvi-131706	Vitis vinifera	27.83	5.00e-09	56.60
IUUC-Xtr-132178	Xenopus tropicalis	46.60	0.00e+00	638.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence