iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135659

Ensembl Protein ID

Zm00001d042793_T003

UniProt Accession

A0A1D6N6R4; A0A1D6N6R4_MAIZE

Genbank Protein ID

ONM36291.1; ONM36294.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM007649; CM007649

Gene Name

ZEAMMB73_Zm00001d042793

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d042793	Zm00001d042793_T010	Zm00001d042793_T010
Zm00001d042793	Zm00001d042793_T011	Zm00001d042793_T011
Zm00001d042793	Zm00001d042793_T001	Zm00001d042793_T001
Zm00001d042793	Zm00001d042793_T004	Zm00001d042793_T004
Zm00001d042793	Zm00001d042793_T003	Zm00001d042793_T003
Zm00001d042793	Zm00001d042793_T007	Zm00001d042793_T007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-06	30.1	1064	1090

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf....sdtllvsGsdDgtikvWDlr 31
           +++    + +++++G++Dgt+ +W+++
   Q: 1064 VDWspspPHDMILAGCHDGTVALWNFS 1090
           78998754499**************76 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAAAPPVAGE DIKDGVEVCL FDESADGFSR TVRAISELVD IEPETDFPEA EVERLSSSIT 60
FLREWRHFSY EPKSVTFTNG TESTSYRDDM HSVTLPQFSS ASVPQITPQE DRGDNTVSFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGATGGGC CATAGATCAG TTCTATTTCT CCTCACAATC CGCCCCATAT CATAAAGCCC 60
AACCCCACTT CCCGTTTTTC ATGCGCGTGA GGGGGTGTGG TGTTCTTCCG TTCGGTTAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR017956--AT_hook_DNA-bd_motif
IPR000637--HMGI/Y_DNA-bd_CS
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00354--HMGI_Y
PS00678--WD_REPEATS_1

PRINTS

PR00929--ATHOOK

SMART

SM00384--AT_hook
SM00320--WD40

Gene Ontology

GO:0003677--F:DNA binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000091	Aegilops tauschii	46.65	0.00e+00	787.00
IUUC-Aml-001488	Ailuropoda melanoleuca	31.50	3.00e-12	67.00
IUUC-Apl-003185	Anas platyrhynchos	28.37	6.00e-17	82.40
IUUC-Aca-005245	Anolis carolinensis	24.82	1.00e-13	71.60
IUUC-Ath-006785	Arabidopsis thaliana	42.35	3.00e-111	395.00
IUUC-Ame-010654	Astyanax mexicanus	30.53	1.00e-13	71.20
IUUC-Bta-012551	Bos taurus	31.50	4.00e-12	66.60
IUUC-Bdi-014228	Brachypodium distachyon	50.32	0.00e+00	793.00
IUUC-Bol-015619	Brassica oleracea	44.42	2.00e-119	423.00
IUUC-Bra-017566	Brassica rapa	54.19	5.00e-107	381.00
IUUC-Cja-019727	Callithrix jacchus	31.50	4.00e-12	66.60
IUUC-Cfa-020469	Canis familiaris	31.50	3.00e-12	67.40
IUUC-Cpo-021854	Cavia porcellus	30.71	2.00e-11	64.30
IUUC-Csa-023726	Chlorocebus sabaeus	31.50	3.00e-12	67.00
IUUC-Cho-024296	Choloepus hoffmanni	31.50	2.00e-12	67.80
IUUC-Dre-028735	Danio rerio	30.20	4.00e-16	79.70
IUUC-Dno-028895	Dasypus novemcinctus	31.50	3.00e-12	67.00
IUUC-Dor-030617	Dipodomys ordii	25.75	1.00e-13	72.00
IUUC-Eca-033420	Equus caballus	31.06	2.00e-12	67.40
IUUC-Eeu-035060	Erinaceus europaeus	30.48	1.00e-05	45.10
IUUC-Fca-035603	Felis catus	31.50	3.00e-12	67.00
IUUC-Fal-037637	Ficedula albicollis	29.70	1.00e-16	81.60
IUUC-Gga-040991	Gallus gallus	28.30	5.00e-17	83.20
IUUC-Ggo-045595	Gorilla gorilla	31.50	3.00e-12	67.00
IUUC-Hsa-046196	Homo sapiens	31.50	3.00e-12	67.00
IUUC-Hvu-047758	Hordeum vulgare	52.33	0.00e+00	776.00
IUUC-Itr-048222	Ictidomys tridecemlineatus	31.50	2.00e-12	67.80
IUUC-Lch-050384	Latimeria chalumnae	27.32	1.00e-10	61.60
IUUC-Lpe-050995	Leersia perrieri	47.67	3.00e-174	605.00
IUUC-Loc-052778	Lepisosteus oculatus	25.79	2.00e-17	84.70
IUUC-Laf-054474	Loxodonta africana	31.50	3.00e-12	67.00
IUUC-Mcc-055795	Macaca mulatta	31.50	2.00e-12	67.40
IUUC-Mga-059757	Meleagris gallopavo	34.02	5.00e-11	60.50
IUUC-Mmr-061702	Microcebus murinus	31.50	3.00e-12	67.00
IUUC-Mdo-063012	Monodelphis domestica	36.08	2.00e-12	67.40
IUUC-Mmu-063858	Mus musculus	30.71	7.00e-12	65.90
IUUC-Mpu-066147	Mustela putorius furo	30.84	4.00e-07	50.10
IUUC-Mlu-067530	Myotis lucifugus	31.50	3.00e-11	63.50
IUUC-Nle-069278	Nomascus leucogenys	31.50	3.00e-12	67.00
IUUC-Opr-070222	Ochotona princeps	31.50	5.00e-12	66.20
IUUC-Ont-071367	Oreochromis niloticus	26.75	1.00e-15	78.20
IUUC-Oan-073357	Ornithorhynchus anatinus	33.86	2.00e-12	66.60
IUUC-Ocu-074887	Oryctolagus cuniculus	30.71	4.00e-12	66.60
IUUC-Obr-076376	Oryza brachyantha	41.48	0.00e+00	627.00
IUUC-Ogl-077258	Oryza glaberrima	51.41	0.00e+00	721.00
IUUC-Ogu-078002	Oryza glumaepatula	53.52	2.00e-152	532.00
IUUC-Oin-079689	Oryza indica	51.01	0.00e+00	717.00
IUUC-Olo-080486	Oryza longistaminata	43.23	7.00e-122	431.00
IUUC-Oni-082369	Oryza nivara	51.45	0.00e+00	705.00
IUUC-Opu-083230	Oryza punctata	50.71	0.00e+00	770.00
IUUC-Osa-085403	Oryza sativa	54.90	0.00e+00	635.00
IUUC-Ola-087512	Oryzias latipes	33.65	4.00e-10	58.50
IUUC-Oga-088051	Otolemur garnettii	31.50	2.00e-12	67.40
IUUC-Oar-090076	Ovis aries	31.50	5.00e-12	66.20
IUUC-Ptr-091503	Pan troglodytes	31.50	2.00e-12	67.00
IUUC-Pan-092123	Papio anubis	31.50	3.00e-12	67.00
IUUC-Psi-094020	Pelodiscus sinensis	29.05	5.00e-16	79.30
IUUC-Ppa-095644	Physcomitrella patens	41.18	1.00e-57	216.00
IUUC-Pfo-097023	Poecilia formosa	27.73	3.00e-12	67.40
IUUC-Pab-097532	Pongo abelii	31.50	3.00e-12	67.00
IUUC-Pop-099342	Populus trichocarpa	42.34	2.00e-118	419.00
IUUC-Pca-100255	Procavia capensis	31.50	2.00e-12	67.40
IUUC-Ppe-101268	Prunus persica	52.38	4.00e-105	375.00
IUUC-Pva-102403	Pteropus vampyrus	31.50	4.00e-12	66.60
IUUC-Rno-105329	Rattus norvegicus	30.71	7.00e-12	65.90
IUUC-Sha-106857	Sarcophilus harrisii	37.11	2.00e-12	67.80
IUUC-Sit-110532	Setaria italica	60.00	0.00e+00	825.00
IUUC-Sly-110922	Solanum lycopersicum	53.35	5.00e-98	352.00
IUUC-Sar-113690	Sorex araneus	30.00	7.00e-07	48.90
IUUC-Sbi-114680	Sorghum bicolor	70.47	0.00e+00	1863.00
IUUC-Tgu-117058	Taeniopygia guttata	34.02	5.00e-11	61.20
IUUC-Tru-118675	Takifugu rubripes	25.72	4.00e-17	82.80
IUUC-Tsy-119606	Tarsius syrichta	29.13	1.00e-07	52.00
IUUC-Tni-120125	Tetraodon nigroviridis	29.27	3.00e-10	58.50
IUUC-Tae-124395	Triticum aestivum	47.81	0.00e+00	783.00
IUUC-Tur-126862	Triticum urartu	47.01	0.00e+00	788.00
IUUC-Tbe-127727	Tupaia belangeri	30.71	7.00e-12	65.90
IUUC-Ttr-128425	Tursiops truncatus	31.50	5.00e-12	66.20
IUUC-Vpa-130050	Vicugna pacos	31.50	2.00e-12	67.40
IUUC-Vvi-131706	Vitis vinifera	46.17	7.00e-125	441.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence