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Tag Content
iUUCD ID IUUC-Aly-005453
Ensembl Protein ID fgenesh2_kg.3__3506__AT2G16405.1
UniProt Accession D7L1V6; D7L1V6_ARALL
Genbank Protein ID EFH62484.1
Protein Name Transducin family protein
Genbank Nucleotide ID GL348715
Gene Name ARALYDRAFT_480805
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.3__3506__AT2G16405.1 fgenesh2_kg.3__3506__AT2G16405.1 fgenesh2_kg.3__3506__AT2G16405.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.20e-24 84.7 214 252
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +vt+++f s+  +++s+s D+ti+vW+l++gv+++
   Q: 214  GHSKDVTDFDFsSNnQYIASSSLDKTIRVWELSRGVCIR 252
           8***********555*********************986 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MEEKTGSSEV EIVEKDEAKK QSKDPEFISC MMQPATAESD PQYIGIRRIL LHRKAESGVI 60
SRRYDWRCNG KGYVAYRNFI SKPRKWENLR TPSLLSSPGN SGRWLPSPSP LSHQFEAESF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-005453|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AATTCAGAAC TTGAGACTGA TCAATTGATT GATTTTCACT CATCACTTTG CAACGATTTG 60
ATCTACGAGC AAGGTGGATA CTCGGAAAAT TGATCAAAAA TGGAGGAGAA AACCGGATCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-005453|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
KEGG aly:ARALYDRAFT_480805
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001029 Aegilops tauschii 53.85 4.00e-94 337.00
IUUC-Aml-001761 Ailuropoda melanoleuca 35.73 2.00e-52 199.00
IUUC-Atr-002577 Amborella trichopoda 65.34 0.00e+00 650.00
IUUC-Aca-004423 Anolis carolinensis 33.69 7.00e-52 197.00
IUUC-Ath-007256 Arabidopsis thaliana 97.30 0.00e+00 938.00
IUUC-Ame-010600 Astyanax mexicanus 35.15 9.00e-47 180.00
IUUC-Bta-013511 Bos taurus 35.73 2.00e-52 199.00
IUUC-Bdi-014322 Brachypodium distachyon 62.12 3.00e-155 540.00
IUUC-Bol-015992 Brassica oleracea 91.36 0.00e+00 879.00
IUUC-Bra-017399 Brassica rapa 94.27 0.00e+00 857.00
IUUC-Cja-019508 Callithrix jacchus 35.47 2.00e-52 199.00
IUUC-Cfa-020273 Canis familiaris 37.80 1.00e-52 199.00
IUUC-Cpo-022002 Cavia porcellus 35.73 2.00e-52 199.00
IUUC-Cre-022575 Chlamydomonas reinhardtii 26.80 2.00e-16 79.70
IUUC-Csa-023862 Chlorocebus sabaeus 35.73 1.00e-52 199.00
IUUC-Cin-025687 Ciona intestinalis 33.41 4.00e-64 238.00
IUUC-Csv-025992 Ciona savignyi 38.37 6.00e-64 237.00
IUUC-Dre-028697 Danio rerio 34.75 3.00e-49 188.00
IUUC-Dno-029208 Dasypus novemcinctus 35.47 2.00e-52 199.00
IUUC-Dor-030316 Dipodomys ordii 38.55 3.00e-30 125.00
IUUC-Eca-033362 Equus caballus 31.11 2.00e-33 135.00
IUUC-Eeu-034599 Erinaceus europaeus 33.51 3.00e-25 108.00
IUUC-Fca-035874 Felis catus 35.73 2.00e-52 199.00
IUUC-Gmo-039176 Gadus morhua 37.80 1.00e-49 189.00
IUUC-Gac-041802 Gasterosteus aculeatus 36.00 3.00e-52 198.00
IUUC-Gma-043284 Glycine max 76.62 0.00e+00 717.00
IUUC-Ggo-045546 Gorilla gorilla 35.73 2.00e-52 199.00
IUUC-Hsa-046407 Homo sapiens 35.73 2.00e-52 199.00
IUUC-Hvu-047726 Hordeum vulgare 60.77 2.00e-147 514.00
IUUC-Itr-048939 Ictidomys tridecemlineatus 35.73 2.00e-52 199.00
IUUC-Lpe-051374 Leersia perrieri 59.34 4.00e-155 540.00
IUUC-Loc-052403 Lepisosteus oculatus 32.62 1.00e-45 176.00
IUUC-Laf-053721 Loxodonta africana 35.73 2.00e-52 199.00
IUUC-Mcc-055449 Macaca mulatta 35.73 2.00e-52 199.00
IUUC-Meu-056487 Macropus eugenii 32.70 2.00e-50 192.00
IUUC-Mtr-058659 Medicago truncatula 69.70 0.00e+00 689.00
IUUC-Mmr-061406 Microcebus murinus 35.73 3.00e-52 197.00
IUUC-Mdo-062331 Monodelphis domestica 35.26 6.00e-45 174.00
IUUC-Mmu-064001 Mus musculus 37.80 6.00e-52 197.00
IUUC-Mac-064934 Musa acuminata 70.49 0.00e+00 666.00
IUUC-Mpu-065871 Mustela putorius furo 35.73 2.00e-52 199.00
IUUC-Mlu-067463 Myotis lucifugus 36.00 1.00e-51 196.00
IUUC-Nle-070136 Nomascus leucogenys 35.73 1.00e-52 200.00
IUUC-Opr-070913 Ochotona princeps 38.11 2.00e-49 189.00
IUUC-Ont-071347 Oreochromis niloticus 35.47 3.00e-51 195.00
IUUC-Oan-073527 Ornithorhynchus anatinus 32.11 2.00e-43 168.00
IUUC-Ocu-074829 Oryctolagus cuniculus 34.46 1.00e-47 183.00
IUUC-Oba-075666 Oryza barthii 62.61 3.00e-157 547.00
IUUC-Obr-076413 Oryza brachyantha 62.61 3.00e-153 533.00
IUUC-Ogl-076998 Oryza glaberrima 63.70 4.00e-156 543.00
IUUC-Ogu-078287 Oryza glumaepatula 62.83 5.00e-158 550.00
IUUC-Oin-079359 Oryza indica 62.39 4.00e-157 546.00
IUUC-Olo-080438 Oryza longistaminata 67.66 1.00e-92 332.00
IUUC-Ome-081328 Oryza meridionalis 62.61 1.00e-160 558.00
IUUC-Oni-082574 Oryza nivara 62.61 3.00e-157 547.00
IUUC-Opu-083376 Oryza punctata 57.71 3.00e-140 491.00
IUUC-Oru-085162 Oryza rufipogon 62.26 9.00e-153 532.00
IUUC-Osa-085507 Oryza sativa 62.26 9.00e-153 532.00
IUUC-Ola-087387 Oryzias latipes 36.89 6.00e-47 181.00
IUUC-Oga-088694 Otolemur garnettii 35.73 2.00e-52 199.00
IUUC-Oar-090355 Ovis aries 35.73 2.00e-52 199.00
IUUC-Ptr-091488 Pan troglodytes 31.75 1.00e-29 123.00
IUUC-Pan-092516 Papio anubis 35.73 1.00e-52 199.00
IUUC-Pma-094572 Petromyzon marinus 32.62 1.00e-58 219.00
IUUC-Ppa-096003 Physcomitrella patens 54.01 2.00e-128 451.00
IUUC-Pfo-096819 Poecilia formosa 38.10 1.00e-48 187.00
IUUC-Pab-098373 Pongo abelii 35.66 7.00e-52 197.00
IUUC-Pop-099930 Populus trichocarpa 78.04 0.00e+00 737.00
IUUC-Pca-100248 Procavia capensis 35.47 7.00e-50 191.00
IUUC-Ppe-101592 Prunus persica 73.86 0.00e+00 684.00
IUUC-Pva-102971 Pteropus vampyrus 36.00 2.00e-52 199.00
IUUC-Rno-105386 Rattus norvegicus 38.04 1.00e-51 196.00
IUUC-Sha-107418 Sarcophilus harrisii 35.73 8.00e-50 190.00
IUUC-Smo-108859 Selaginella moellendorffii 51.32 2.00e-128 451.00
IUUC-Sit-109987 Setaria italica 62.98 4.00e-162 563.00
IUUC-Sly-111433 Solanum lycopersicum 78.12 1.00e-155 541.00
IUUC-Stu-112677 Solanum tuberosum 71.97 0.00e+00 711.00
IUUC-Sar-113317 Sorex araneus 33.94 2.00e-18 86.30
IUUC-Sbi-114115 Sorghum bicolor 60.26 8.00e-91 326.00
IUUC-Tru-118749 Takifugu rubripes 35.28 3.00e-50 192.00
IUUC-Tni-119685 Tetraodon nigroviridis 35.54 3.00e-50 192.00
IUUC-Tca-121769 Theobroma cacao 76.50 0.00e+00 729.00
IUUC-Tae-125563 Triticum aestivum 60.36 1.00e-92 331.00
IUUC-Tur-126403 Triticum urartu 54.70 3.00e-94 337.00
IUUC-Tbe-127245 Tupaia belangeri 37.04 5.00e-35 141.00
IUUC-Ttr-128854 Tursiops truncatus 35.73 3.00e-54 205.00
IUUC-Vvi-131113 Vitis vinifera 74.73 0.00e+00 692.00
IUUC-Xtr-132420 Xenopus tropicalis 34.13 5.00e-46 177.00
IUUC-Xma-134302 Xiphophorus maculatus 35.20 3.00e-51 195.00
Created Date 25-Jun-2017

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