iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043255

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000840

Gene Name

LOC100802120; GLYMA_07G012300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA07G01480	GLYMA07G01480.1	GLYMA07G01480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	9.10e-61	207.5	105	475
ULD/UDP/UBQ/UBQ_Other	1.80e-09	39.0	5	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefs.....gyeqq 90
           Gl NlgNtCYmNS+LQcL+++pel+++l + ++++ ++++ ++++  l+ + ++lf+el +++ k v+p +++ +l+k+ ++f       ++qq
   Q: 105  GLFNLGNTCYMNSTLQCLHSVPELKSALTN-YSHSGRNNDVDQSSHLLTIATRDLFSEL-DKSVKPVAPMQFWMVLRKKYPQFGqlhngVFMQQ 196
           9*****************************.888888888899999*************.99999******************98999899*** PP
   S: 91   DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkk 184
           Da+E++++ll +l+++l                       ++   ++n++ ++ lF+++l s+i c+e +++ss+ e+ ++l+++++++ +  +
   Q: 197  DAEECWTQLLYTLSQSL-----------------------RSPGSSENPDAVKALFGIELISRIHCQESKEESSEAESVYSLKCHISQEVNHLH 267
           *****************.......................456778999*****************************************9999 PP
   S: 185  eslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts........... 267
           e +++ L+s  ++ +l            ++    k+ +++ lP++L++++ Rf +++e +++ ki +kv++pleLd+  fc++           
   Q: 268  EGIKHGLKSELEKASLV---------LGRSAIHLKESRINALPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDelrkkleaprq 352
           99999998888888886.........334444568899*********************************************66666666666 PP
   S: 268  ....................peekqke.................................kkkYeLiavvvHsG.slssGHYvayvknekgkWl 307
                               +     +                                 + +Y+L+av+ H+G s++sGHYv +vk+e+gkW+
   Q: 353  ilrneegkklglkvnekssvQ-----KendvkmsdaegatsgggepsvvpmeegeketqmTGIYDLVAVLTHKGrSADSGHYVGWVKQENGKWI 441
           666666666666555555550.....05555566666666666666666666666666679********************************* PP
   S: 308  lfdDskVtevkeeevleetg....staYvlfYkr 337
           +fdD++ ++  ee++ + +g    + aY+ +Yk 
   Q: 442  EFDDDNPKPKLEEDITRLSGggdwHMAYIIMYKA 475
           *****************888************97 PP

ULD/UDP/UBQ/UBQ_Other

   S: 4    tvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
            v++ +    +++++ + +  ++K ++++++g+ppe+q++++kG +L+dd +++ +g+k+g++++++ +
   Q: 5    SVRWQKEIFKDVELDTTQSPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWSTVGVKEGQKLMMMGT 73
           5666666666666666667778999*****************************************976 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MITVSVRWQK EIFKDVELDT TQSPYVFKCQ LYDLTGVPPE RQKIMVKGGL LKDDADWSTV 60
GVKEGQKLMM MGTADEVVKT PEKGTVFVED LPEEEQVVAV GHTAGLFNLG NTCYMNSTLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATATGATTT AGTAGAGAGT CGCGGTCCAA CAAAAGAAGA GTCTCGTGGG GTTGGGTTCG 60
TCGGCTGGCG CAGTGAACAC GAGAGAGTGG GCCAGACAAT CTCCTCTTGC TCTCGCCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00240--ubiquitin
PF00443--UCH

SMART

SM00213--UBQ

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100802120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000893	Aegilops tauschii	53.68	1.00e-85	310.00
IUUC-Aml-002053	Ailuropoda melanoleuca	42.71	5.00e-106	377.00
IUUC-Atr-002725	Amborella trichopoda	77.71	0.00e+00	726.00
IUUC-Apl-004031	Anas platyrhynchos	42.05	8.00e-105	374.00
IUUC-Aca-004361	Anolis carolinensis	40.60	1.00e-103	370.00
IUUC-Aly-006078	Arabidopsis lyrata	75.16	0.00e+00	726.00
IUUC-Ath-007623	Arabidopsis thaliana	74.74	0.00e+00	721.00
IUUC-Ago-007796	Ashbya gossypii	32.08	1.00e-60	227.00
IUUC-Afl-008732	Aspergillus flavus	38.66	4.00e-83	301.00
IUUC-Afu-008755	Aspergillus fumigatus	37.21	3.00e-79	289.00
IUUC-Ani-009148	Aspergillus nidulans	38.01	4.00e-84	305.00
IUUC-Ang-009878	Aspergillus niger	37.26	6.00e-78	285.00
IUUC-Aor-010239	Aspergillus oryzae	38.66	4.00e-83	301.00
IUUC-Ate-010243	Aspergillus terreus	37.32	8.00e-80	291.00
IUUC-Ame-011327	Astyanax mexicanus	57.53	2.00e-22	100.00
IUUC-Bgr-012231	Blumeria graminis	36.94	7.00e-82	298.00
IUUC-Bta-012553	Bos taurus	42.83	1.00e-106	379.00
IUUC-Bdi-014567	Brachypodium distachyon	71.34	0.00e+00	687.00
IUUC-Bol-015565	Brassica oleracea	75.00	0.00e+00	747.00
IUUC-Bra-017297	Brassica rapa	74.49	0.00e+00	743.00
IUUC-Cel-018140	Caenorhabditis elegans	36.57	2.00e-78	286.00
IUUC-Cja-019516	Callithrix jacchus	42.26	2.00e-106	379.00
IUUC-Cfa-020808	Canis familiaris	43.23	6.00e-108	384.00
IUUC-Cpo-021688	Cavia porcellus	43.03	6.00e-107	381.00
IUUC-Cre-022663	Chlamydomonas reinhardtii	41.37	2.00e-97	349.00
IUUC-Csa-023429	Chlorocebus sabaeus	42.63	2.00e-106	379.00
IUUC-Cho-024347	Choloepus hoffmanni	42.83	2.00e-106	379.00
IUUC-Cin-025198	Ciona intestinalis	37.22	3.00e-81	295.00
IUUC-Csv-026007	Ciona savignyi	34.73	1.00e-81	297.00
IUUC-Cgl-026757	Colletotrichum gloeosporioides	37.54	2.00e-81	296.00
IUUC-Cne-026963	Cryptococcus neoformans	37.02	6.00e-76	278.00
IUUC-Cme-027240	Cyanidioschyzon merolae	34.49	4.00e-65	242.00
IUUC-Dre-027647	Danio rerio	41.53	7.00e-106	377.00
IUUC-Dno-029967	Dasypus novemcinctus	42.43	1.00e-105	376.00
IUUC-Dor-030886	Dipodomys ordii	37.19	4.00e-74	272.00
IUUC-Dme-032079	Drosophila melanogaster	37.73	1.00e-91	330.00
IUUC-Ete-032351	Echinops telfairi	40.70	2.00e-97	349.00
IUUC-Eca-033461	Equus caballus	43.23	3.00e-110	392.00
IUUC-Fca-036210	Felis catus	43.23	4.00e-108	385.00
IUUC-Fal-037528	Ficedula albicollis	42.42	8.00e-103	367.00
IUUC-Fox-037805	Fusarium oxysporum	46.20	2.00e-78	286.00
IUUC-Fso-038177	Fusarium solani	45.28	2.00e-75	276.00
IUUC-Gmo-038953	Gadus morhua	39.92	4.00e-99	354.00
IUUC-Ggr-039972	Gaeumannomyces graminis	35.48	2.00e-75	276.00
IUUC-Gga-040462	Gallus gallus	42.17	2.00e-105	375.00
IUUC-Gac-041312	Gasterosteus aculeatus	41.90	2.00e-103	369.00
IUUC-Ggo-045458	Gorilla gorilla	38.81	5.00e-84	304.00
IUUC-Hsa-045706	Homo sapiens	42.63	2.00e-106	379.00
IUUC-Hvu-047821	Hordeum vulgare	69.33	1.00e-102	365.00
IUUC-Itr-048654	Ictidomys tridecemlineatus	42.43	2.00e-107	382.00
IUUC-Lch-050464	Latimeria chalumnae	41.73	5.00e-105	374.00
IUUC-Lpe-051419	Leersia perrieri	70.92	0.00e+00	661.00
IUUC-Loc-052732	Lepisosteus oculatus	40.88	1.00e-106	380.00
IUUC-Laf-053822	Loxodonta africana	43.23	2.00e-108	385.00
IUUC-Mcc-055893	Macaca mulatta	42.63	2.00e-106	379.00
IUUC-Meu-056307	Macropus eugenii	39.11	2.00e-96	346.00
IUUC-Mpo-057415	Magnaporthe poae	36.58	5.00e-77	281.00
IUUC-Mtr-057901	Medicago truncatula	89.38	0.00e+00	892.00
IUUC-Mga-060016	Meleagris gallopavo	41.60	1.00e-104	373.00
IUUC-Mvi-060562	Microbotryum violaceum	31.84	4.00e-65	242.00
IUUC-Mmr-060624	Microcebus murinus	43.03	3.00e-109	388.00
IUUC-Mdo-061809	Monodelphis domestica	42.66	4.00e-106	378.00
IUUC-Mmu-063869	Mus musculus	41.68	1.00e-106	380.00
IUUC-Mac-064876	Musa acuminata	72.35	0.00e+00	669.00
IUUC-Mpu-066480	Mustela putorius furo	43.23	6.00e-108	384.00
IUUC-Mlu-067866	Myotis lucifugus	43.23	2.00e-108	385.00
IUUC-Nfi-068393	Neosartorya fischeri	36.75	3.00e-78	286.00
IUUC-Ncr-068815	Neurospora crassa	37.98	2.00e-86	313.00
IUUC-Nle-070121	Nomascus leucogenys	47.69	3.00e-56	211.00
IUUC-Opr-070712	Ochotona princeps	32.57	3.00e-55	209.00
IUUC-Ont-071544	Oreochromis niloticus	41.77	7.00e-99	354.00
IUUC-Oan-073635	Ornithorhynchus anatinus	41.01	4.00e-82	298.00
IUUC-Ocu-074926	Oryctolagus cuniculus	42.32	7.00e-106	377.00
IUUC-Oba-075633	Oryza barthii	70.29	0.00e+00	655.00
IUUC-Obr-076423	Oryza brachyantha	71.40	0.00e+00	661.00
IUUC-Ogl-077913	Oryza glaberrima	72.50	0.00e+00	667.00
IUUC-Ogu-078435	Oryza glumaepatula	70.29	0.00e+00	655.00
IUUC-Oin-080072	Oryza indica	70.08	0.00e+00	654.00
IUUC-Olo-080535	Oryza longistaminata	64.05	6.00e-168	583.00
IUUC-Ome-081309	Oryza meridionalis	70.29	0.00e+00	655.00
IUUC-Oni-083113	Oryza nivara	70.29	0.00e+00	655.00
IUUC-Opu-083168	Oryza punctata	68.20	2.00e-180	624.00
IUUC-Oru-084253	Oryza rufipogon	70.29	0.00e+00	655.00
IUUC-Osa-085554	Oryza sativa	72.29	0.00e+00	664.00
IUUC-Ola-086998	Oryzias latipes	41.00	1.00e-100	360.00
IUUC-Olu-087818	Ostreococcus lucimarinus	42.83	6.00e-97	347.00
IUUC-Oga-088571	Otolemur garnettii	42.91	3.00e-107	382.00
IUUC-Oar-089526	Ovis aries	42.83	8.00e-107	380.00
IUUC-Ptr-091433	Pan troglodytes	42.63	2.00e-106	379.00
IUUC-Pan-091966	Papio anubis	42.63	2.00e-106	379.00
IUUC-Psi-093458	Pelodiscus sinensis	42.07	1.00e-98	353.00
IUUC-Pma-094343	Petromyzon marinus	39.93	8.00e-53	200.00
IUUC-Pno-095109	Phaeosphaeria nodorum	35.60	2.00e-80	293.00
IUUC-Ppa-095756	Physcomitrella patens	63.88	3.00e-172	597.00
IUUC-Pfo-096514	Poecilia formosa	41.16	3.00e-98	352.00
IUUC-Pab-098477	Pongo abelii	37.92	4.00e-76	278.00
IUUC-Pop-099221	Populus trichocarpa	80.12	0.00e+00	766.00
IUUC-Pca-100791	Procavia capensis	34.85	5.00e-59	221.00
IUUC-Ppe-101812	Prunus persica	82.29	0.00e+00	769.00
IUUC-Pva-102462	Pteropus vampyrus	39.95	3.00e-82	298.00
IUUC-Pte-104109	Pyrenophora teres	35.86	3.00e-82	299.00
IUUC-Pyt-104766	Pyrenophora triticirepentis	35.43	1.00e-80	293.00
IUUC-Rno-105351	Rattus norvegicus	41.28	4.00e-105	375.00
IUUC-Sce-106168	Saccharomyces cerevisiae	34.36	3.00e-63	236.00
IUUC-Sha-107491	Sarcophilus harrisii	42.49	6.00e-107	381.00
IUUC-Sja-107769	Schizosaccharomyces japonicus	38.65	6.00e-79	288.00
IUUC-Spo-108174	Schizosaccharomyces pombe	39.88	4.00e-82	298.00
IUUC-Smo-108805	Selaginella moellendorffii	67.01	0.00e+00	626.00
IUUC-Sit-110361	Setaria italica	73.18	0.00e+00	699.00
IUUC-Sly-110965	Solanum lycopersicum	78.67	0.00e+00	767.00
IUUC-Sbi-114778	Sorghum bicolor	72.18	0.00e+00	689.00
IUUC-Ssc-116273	Sus scrofa	43.03	1.00e-105	376.00
IUUC-Tgu-117063	Taeniopygia guttata	42.22	7.00e-103	367.00
IUUC-Tru-118381	Takifugu rubripes	41.43	2.00e-101	362.00
IUUC-Tsy-119076	Tarsius syrichta	40.53	3.00e-42	165.00
IUUC-Tni-119941	Tetraodon nigroviridis	41.28	3.00e-97	348.00
IUUC-Tca-121246	Theobroma cacao	84.06	0.00e+00	815.00
IUUC-Tvi-122543	Trichoderma virens	36.14	7.00e-80	291.00
IUUC-Tae-125484	Triticum aestivum	70.00	0.00e+00	677.00
IUUC-Tur-126128	Triticum urartu	55.96	2.00e-83	302.00
IUUC-Tbe-128030	Tupaia belangeri	38.55	1.00e-88	320.00
IUUC-Ttr-128701	Tursiops truncatus	39.30	2.00e-77	283.00
IUUC-Uma-129657	Ustilago maydis	32.90	1.00e-76	280.00
IUUC-Vda-129723	Verticillium dahliae	36.75	3.00e-80	292.00
IUUC-Vpa-130284	Vicugna pacos	29.71	4.00e-31	129.00
IUUC-Vvi-131037	Vitis vinifera	83.44	0.00e+00	818.00
IUUC-Xtr-132235	Xenopus tropicalis	41.85	2.00e-106	379.00
IUUC-Xma-133840	Xiphophorus maculatus	40.96	3.00e-102	365.00
IUUC-Yli-134453	Yarrowia lipolytica	37.57	2.00e-84	306.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence