iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d045837	Zm00001d045837_T002	Zm00001d045837_T002
Zm00001d045837	Zm00001d045837_T001	Zm00001d045837_T001
Zm00001d045837	Zm00001d045837_T003	Zm00001d045837_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-06	29.9	42	72

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H d  ++ a+ +d  ++++G+ D+t+++WD 
   Q: 42   HLDFSFASAWsPDgLTFATGNQDKTCRIWDA 72
           6666667789*99888**************5 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MLGTSHTSLS PDGKLVIIVG DDTDALLIDA NSGKTIHSMK GHLDFSFASA WSPDGLTFAT 60
GNQDKTCRIW DARNLTESVH VLRGNVGAIR SIRFTSDGHF LSMAEAADFV HIFDIKSDYN 120

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Nucleotide Sequence
(Fasta)

ATGCTCGGCA CATCCGTTGA CGGGAAGGCG AGATGACAGG CGGGTCCCAG GGCGCAGCGA 60
GTCACCAGGG TCGCGTCGCG CGCGCGGAGG AGCGACAGAC AAGCGGGCCC TGAGCGCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR019417--DUF2415
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF10313--DUF2415
PF00400--WD40

SMART

SM00320--WD40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence