iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135776

Ensembl Protein ID

Zm00001d046047_T001

UniProt Accession

A0A1D6P0R1; A0A1D6P0R1_MAIZE

Genbank Protein ID

AQL03673.1; AQL03675.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM000785; CM000785

Gene Name

ZEAMMB73_Zm00001d046047

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d046047	Zm00001d046047_T017	Zm00001d046047_T017
Zm00001d046047	Zm00001d046047_T003	Zm00001d046047_T003
Zm00001d046047	Zm00001d046047_T007	Zm00001d046047_T007
Zm00001d046047	Zm00001d046047_T022	Zm00001d046047_T022
Zm00001d046047	Zm00001d046047_T005	Zm00001d046047_T005
Zm00001d046047	Zm00001d046047_T009	Zm00001d046047_T009
Zm00001d046047	Zm00001d046047_T001	Zm00001d046047_T001
Zm00001d046047	Zm00001d046047_T018	Zm00001d046047_T018
Zm00001d046047	Zm00001d046047_T002	Zm00001d046047_T002
Zm00001d046047	Zm00001d046047_T023	Zm00001d046047_T023

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-08	34.4	499	545

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl..af....sd..tl...lvsGsdDgtikvWDlrtgvll 36
           gH++ + cl  ++    +d  ++   l+sGs D+t++vWDl+ g+ll
   Q: 499  GHKGAILCLaaHYmhahPDsrNFhraLISGSLDCTVRVWDLDAGTLL 545
           899*****944449999554444677***************999876 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MKCHSVAALW SPLPPSHHVT AAATTPVALF TGAADGTVLH WPLALASASP SPRPSSLLCA 60
HAAAITSLCP LPSPASLLVA CTAGVLSLFS TYAPLRCLRR RSLPLWVGSP SLIASLPSIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGATCTTCC CCTCCGGTAT AGACTAGGCC TCGCCGGATG CCGGATCACC CTACCCCACC 60
CCACCAATGC GATGAAGTGC CACTCTGTGG CCGCGCTCTG GTCGCCGTTG CCGCCGTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000634	Aegilops tauschii	65.83	0.00e+00	973.00
IUUC-Aml-001481	Ailuropoda melanoleuca	28.22	8.00e-13	69.70
IUUC-Atr-002981	Amborella trichopoda	43.79	0.00e+00	1072.00
IUUC-Apl-003943	Anas platyrhynchos	29.45	3.00e-13	70.50
IUUC-Aca-005145	Anolis carolinensis	28.22	6.00e-13	70.10
IUUC-Aly-005882	Arabidopsis lyrata	42.88	0.00e+00	1018.00
IUUC-Ath-006797	Arabidopsis thaliana	42.25	0.00e+00	997.00
IUUC-Ame-011180	Astyanax mexicanus	27.44	7.00e-13	70.10
IUUC-Bta-012912	Bos taurus	28.22	6.00e-13	70.10
IUUC-Bol-016538	Brassica oleracea	42.46	0.00e+00	963.00
IUUC-Bra-018098	Brassica rapa	36.27	2.00e-147	516.00
IUUC-Cel-018565	Caenorhabditis elegans	24.36	2.00e-10	61.60
IUUC-Cja-019970	Callithrix jacchus	28.22	6.00e-13	70.10
IUUC-Cfa-020677	Canis familiaris	28.22	8.00e-13	69.70
IUUC-Cpo-021408	Cavia porcellus	28.22	6.00e-13	70.10
IUUC-Csa-023786	Chlorocebus sabaeus	28.22	6.00e-13	70.10
IUUC-Cho-024612	Choloepus hoffmanni	28.22	9.00e-13	69.70
IUUC-Cin-025255	Ciona intestinalis	26.20	9.00e-15	76.30
IUUC-Csv-026361	Ciona savignyi	27.90	3.00e-15	77.80
IUUC-Cne-026981	Cryptococcus neoformans	23.32	4.00e-06	47.40
IUUC-Dre-027951	Danio rerio	26.28	3.00e-11	62.80
IUUC-Dno-029072	Dasypus novemcinctus	28.22	7.00e-13	69.70
IUUC-Dor-030771	Dipodomys ordii	27.27	3.00e-10	61.20
IUUC-Dme-031768	Drosophila melanogaster	28.12	1.00e-12	68.90
IUUC-Ete-032492	Echinops telfairi	27.44	1.00e-12	69.30
IUUC-Eca-033496	Equus caballus	28.22	8.00e-13	69.70
IUUC-Fca-035530	Felis catus	28.22	6.00e-13	70.10
IUUC-Fal-037238	Ficedula albicollis	28.22	8.00e-13	69.70
IUUC-Gmo-039528	Gadus morhua	27.44	1.00e-12	68.90
IUUC-Gga-041043	Gallus gallus	29.45	2.00e-13	71.60
IUUC-Gac-042524	Gasterosteus aculeatus	26.83	1.00e-12	69.30
IUUC-Gma-044326	Glycine max	44.68	0.00e+00	1055.00
IUUC-Ggo-045112	Gorilla gorilla	28.22	8.00e-13	69.70
IUUC-Hsa-046732	Homo sapiens	28.22	8.00e-13	69.70
IUUC-Itr-048340	Ictidomys tridecemlineatus	26.32	2.00e-13	70.10
IUUC-Lch-050643	Latimeria chalumnae	28.83	6.00e-13	69.70
IUUC-Lpe-051544	Leersia perrieri	74.38	0.00e+00	1866.00
IUUC-Loc-051774	Lepisosteus oculatus	27.50	2.00e-13	71.60
IUUC-Laf-054349	Loxodonta africana	28.22	7.00e-13	69.70
IUUC-Mcc-055800	Macaca mulatta	28.22	7.00e-13	69.70
IUUC-Mtr-058676	Medicago truncatula	43.22	0.00e+00	1059.00
IUUC-Mmr-061271	Microcebus murinus	28.22	8.00e-13	69.70
IUUC-Mdo-062622	Monodelphis domestica	28.83	5.00e-13	70.50
IUUC-Mmu-063262	Mus musculus	28.22	3.00e-12	68.20
IUUC-Mac-065659	Musa acuminata	52.73	0.00e+00	1199.00
IUUC-Mpu-066523	Mustela putorius furo	28.57	7.00e-13	69.70
IUUC-Mlu-067288	Myotis lucifugus	27.61	1.00e-12	68.90
IUUC-Nle-069610	Nomascus leucogenys	28.22	7.00e-13	69.70
IUUC-Opr-070413	Ochotona princeps	27.27	2.00e-10	61.60
IUUC-Ont-072199	Oreochromis niloticus	26.99	7.00e-13	70.10
IUUC-Oan-073095	Ornithorhynchus anatinus	23.75	1.00e-14	75.90
IUUC-Ocu-074257	Oryctolagus cuniculus	28.22	8.00e-13	69.70
IUUC-Oba-075713	Oryza barthii	74.86	0.00e+00	1868.00
IUUC-Obr-076894	Oryza brachyantha	71.18	0.00e+00	1874.00
IUUC-Ogl-077521	Oryza glaberrima	74.86	0.00e+00	1868.00
IUUC-Ogu-078103	Oryza glumaepatula	75.33	0.00e+00	1894.00
IUUC-Oin-080169	Oryza indica	73.21	0.00e+00	1924.00
IUUC-Olo-080818	Oryza longistaminata	70.45	0.00e+00	1678.00
IUUC-Ome-081902	Oryza meridionalis	75.04	0.00e+00	1953.00
IUUC-Oni-082333	Oryza nivara	75.10	0.00e+00	1874.00
IUUC-Opu-083952	Oryza punctata	74.57	0.00e+00	1878.00
IUUC-Oru-085112	Oryza rufipogon	74.94	0.00e+00	1872.00
IUUC-Osa-085615	Oryza sativa	72.13	0.00e+00	989.00
IUUC-Ola-087177	Oryzias latipes	26.99	4.00e-13	70.90
IUUC-Olu-087828	Ostreococcus lucimarinus	30.63	1.00e-18	88.60
IUUC-Oga-088290	Otolemur garnettii	27.81	1.00e-12	69.30
IUUC-Oar-089575	Ovis aries	28.05	2.00e-13	71.60
IUUC-Ptr-091041	Pan troglodytes	28.22	8.00e-13	69.70
IUUC-Pan-092048	Papio anubis	28.22	8.00e-13	69.70
IUUC-Psi-093637	Pelodiscus sinensis	28.83	3.00e-13	71.20
IUUC-Pma-094117	Petromyzon marinus	29.44	1.00e-10	61.20
IUUC-Pfo-096529	Poecilia formosa	26.99	7.00e-13	69.70
IUUC-Pab-098194	Pongo abelii	28.22	8.00e-13	69.70
IUUC-Pop-099546	Populus trichocarpa	44.58	0.00e+00	1142.00
IUUC-Ppe-101653	Prunus persica	44.82	0.00e+00	1144.00
IUUC-Pva-102803	Pteropus vampyrus	28.83	6.00e-13	70.10
IUUC-Rno-105904	Rattus norvegicus	28.22	2.00e-11	65.50
IUUC-Sha-106926	Sarcophilus harrisii	28.31	5.00e-13	69.70
IUUC-Smo-109304	Selaginella moellendorffii	30.20	3.00e-149	522.00
IUUC-Sit-110049	Setaria italica	82.02	0.00e+00	1349.00
IUUC-Sly-111516	Solanum lycopersicum	53.82	0.00e+00	654.00
IUUC-Stu-111982	Solanum tuberosum	54.24	0.00e+00	658.00
IUUC-Sar-113730	Sorex araneus	27.61	1.00e-12	68.90
IUUC-Sbi-114887	Sorghum bicolor	84.60	0.00e+00	1372.00
IUUC-Ssc-116213	Sus scrofa	28.57	6.00e-13	69.30
IUUC-Tgu-117297	Taeniopygia guttata	28.83	4.00e-13	70.90
IUUC-Tru-117887	Takifugu rubripes	27.98	6.00e-13	70.10
IUUC-Tsy-118970	Tarsius syrichta	28.22	8.00e-13	69.70
IUUC-Tni-119791	Tetraodon nigroviridis	26.99	3.00e-13	69.70
IUUC-Tca-121391	Theobroma cacao	45.18	0.00e+00	1080.00
IUUC-Tae-123628	Triticum aestivum	75.07	0.00e+00	1951.00
IUUC-Tur-125959	Triticum urartu	68.10	0.00e+00	1041.00
IUUC-Tbe-127847	Tupaia belangeri	27.27	3.00e-10	60.80
IUUC-Ttr-128200	Tursiops truncatus	28.22	8.00e-13	69.70
IUUC-Vpa-130178	Vicugna pacos	28.22	8.00e-13	69.70
IUUC-Xtr-132699	Xenopus tropicalis	29.45	8.00e-14	72.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence