iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d046856	Zm00001d046856_T001	Zm00001d046856_T001
Zm00001d046856	Zm00001d046856_T002	Zm00001d046856_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-07	32.8	480	510

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           Ht +v ++++ ++  ++vs s D t+kvW+l 
   Q: 480  HTKGVDSVCWdPTgEYVVSVSED-TVKVWSLN 510
           9999*******888*********.*****985 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MMEGGSRADG QNPNQLRLFT CTGNLLHRAH GCARWAQGGI VVLAAVYGPK PGTVRGRTPE 60
KASIEAVWKP RTGQIDTPLF PSSSFCPTAV RVTGSLKWRV VFAGRQEREY EMTLKRTLQS 120

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Nucleotide Sequence
(Fasta)

ATGATGGAGG GAGGTAGCCG CGCGGATGGG CAGAACCCGA ACCAGCTCCG GCTGTTCACC 60
TGCACCGGGA ACTTGCTCCA CCGCGCCCAC GGCTGCGCGC GGTGGGCGCA GGGCGGAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0269--Exonuclease
KW-0378--Hydrolase
KW-0540--Nuclease
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR015633--E2F
IPR003316--E2F_WHTH_DNA-bd_dom
IPR001247--ExoRNase_PH_dom1
IPR002469--Peptidase_S9B_N
IPR027408--PNPase/RNase_PH_dom
IPR020568--Ribosomal_S5_D2-typ_fold
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF02319--E2F_TDP
PF01138--RNase_PH

SMART

SM01372--E2F_TDP
SM00320--WD40

Gene Ontology

GO:0030117--C:membrane coat
GO:0005634--C:nucleus
GO:0005667--C:transcription factor complex
GO:0003677--F:DNA binding
GO:0005198--F:structural molecule activity
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0006886--P:intracellular protein transport
GO:0006351--P:transcription, DNA-templated
GO:0016192--P:vesicle-mediated transport

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence