iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076114

Ensembl Protein ID

OB10G24530.1

UniProt Accession

J3N4K5; J3N4K5_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB10G24530	OB10G24530.1	OB10G24530.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-24	84.6	16	49

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           Ht+ v+ + f  d ++l+sGsdD  +++W+++tg
   Q: 16   HTGCVNTVGFnADgDTLISGSDDQMVMLWNWDTG 49
           9**********55599***************998 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDLVMRLQIH RKLNRHTGCV NTVGFNADGD TLISGSDDQM VMLWNWDTGA VKLQFHSGHS 60
DNVFQARFMP YTDDQTIVTC AADGEVRLAK VADGGDVPTT LLGDHDGRAH KLAIEPGSPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGCGCG ATACGATACG CTTGTTGCTG GGGTGTTTGG GCAAGAGTAT TTTGTTGTTG 60
GGATCGTTGT ACTGGTTGGT TGTTGTAGAT TGCTCACTAG TTTGGCTGAG AGGCTCGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000666	Aegilops tauschii	79.91	0.00e+00	671.00
IUUC-Aly-005505	Arabidopsis lyrata	57.43	1.00e-136	478.00
IUUC-Ath-007629	Arabidopsis thaliana	59.69	8.00e-132	462.00
IUUC-Bdi-014538	Brachypodium distachyon	83.56	0.00e+00	724.00
IUUC-Bol-015797	Brassica oleracea	55.47	6.00e-132	463.00
IUUC-Bra-017142	Brassica rapa	54.74	2.00e-131	461.00
IUUC-Cre-022883	Chlamydomonas reinhardtii	31.74	1.00e-31	130.00
IUUC-Cho-024527	Choloepus hoffmanni	34.90	2.00e-24	107.00
IUUC-Gma-044062	Glycine max	63.17	8.00e-141	493.00
IUUC-Hvu-047075	Hordeum vulgare	80.46	0.00e+00	676.00
IUUC-Lpe-051327	Leersia perrieri	90.32	0.00e+00	779.00
IUUC-Mtr-058683	Medicago truncatula	61.46	1.00e-141	495.00
IUUC-Mac-065466	Musa acuminata	64.84	2.00e-165	574.00
IUUC-Oba-075028	Oryza barthii	90.02	0.00e+00	757.00
IUUC-Ogl-077918	Oryza glaberrima	90.02	0.00e+00	756.00
IUUC-Ogu-078824	Oryza glumaepatula	89.79	0.00e+00	754.00
IUUC-Oin-080061	Oryza indica	89.84	0.00e+00	762.00
IUUC-Olo-081064	Oryza longistaminata	90.26	0.00e+00	760.00
IUUC-Ome-081405	Oryza meridionalis	90.02	0.00e+00	756.00
IUUC-Oni-082481	Oryza nivara	87.36	0.00e+00	744.00
IUUC-Opu-083681	Oryza punctata	89.91	0.00e+00	766.00
IUUC-Oru-084398	Oryza rufipogon	89.61	0.00e+00	760.00
IUUC-Osa-086227	Oryza sativa	89.56	0.00e+00	751.00
IUUC-Olu-087847	Ostreococcus lucimarinus	33.15	3.00e-39	154.00
IUUC-Pop-099784	Populus trichocarpa	59.45	2.00e-150	525.00
IUUC-Ppe-101712	Prunus persica	58.16	1.00e-152	532.00
IUUC-Sit-110744	Setaria italica	76.15	0.00e+00	663.00
IUUC-Sly-111727	Solanum lycopersicum	62.17	3.00e-139	488.00
IUUC-Stu-112421	Solanum tuberosum	62.93	6.00e-140	489.00
IUUC-Sbi-114821	Sorghum bicolor	77.78	0.00e+00	667.00
IUUC-Tca-121555	Theobroma cacao	61.18	8.00e-140	489.00
IUUC-Tae-124421	Triticum aestivum	81.61	0.00e+00	707.00
IUUC-Tur-126617	Triticum urartu	81.65	0.00e+00	708.00
IUUC-Vvi-131540	Vitis vinifera	57.04	5.00e-146	509.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence