• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-006890
UUCD1 version UUC-ArT-00094
Ensembl Protein ID AT1G78770.1
UniProt Accession B3DNN5; Q8GXT0; Q8L5J4; Q8LEK0; Q9ZV95; CDC16_ARATH
Genbank Protein ID AAM95623.1; AAC83033.1; AEE36148.1; ACE62891.1; AAM62610.1; BAC42689.1
Protein Name Anaphase-promoting complex subunit 6; Cell division cycle protein 16 homolog; Cyclosome subunit 6; Protein NOMEGA
Genbank Nucleotide ID AF529177; AC005679; CP002684; BT033023; AY085381; AK118058
Gene Name APC6; CDC16; At1g78770; F9K20.19
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G78770 AT1G78770.1 AT1G78770.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndexHINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C 31.17 1.00e-69 259.00 IUUC-Sce-106205
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication.
 Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication.
Protein Sequence
(Fasta)
MREEEIEKIR GVVRDCVSKH LYSSAIFFAD KVAALTNDPS DIYMQAQALF LGRHYRRAFH 60
LLNASKIVLR DLRFRYLAAK CLEELKEWDQ CLLMLGDAKV DDDGIVYDAK DGNVIDFDKD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006890|E3,APC_C|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GATATATAGA GAGACGAATC CTCGTGGAAT TCACCGGCCC AAGGGTTTTC GTAACGCTTG 60
TTTTTTCTAA CTGTTCCACT CCACTAGTGG CTAATAACCA GAGTGGCGCA CAATAGAATA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006890|E3,APC_C|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-0498--Mitosis
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat
KW-0833--Ubl conjugation pathway
Interpro

IPR011716--TPR-3
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR001440--TPR_1
IPR019734--TPR_repeat
PROSITE

PS50005--TPR
PS50293--TPR_REGION
Pfam

PF00515--TPR_1
PF07720--TPR_3
PF13181--TPR_8
SMART

SM00028--TPR
Gene Ontology

GO:0005634--C:nucleus
GO:0051301--P:cell division
GO:0007067--P:mitotic nuclear division
GO:0010087--P:phloem or xylem histogenesis
GO:0016567--P:protein ubiquitination
GO:0032875--P:regulation of DNA endoreduplication
KEGG ath:AT1G78770
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000117 Aegilops tauschii 64.09 7.00e-171 592.00
IUUC-Aml-001382 Ailuropoda melanoleuca 42.33 1.00e-101 363.00
IUUC-Atr-002720 Amborella trichopoda 76.16 0.00e+00 852.00
IUUC-Apl-003937 Anas platyrhynchos 41.09 7.00e-96 343.00
IUUC-Aca-004235 Anolis carolinensis 38.95 7.00e-98 350.00
IUUC-Aly-005937 Arabidopsis lyrata 98.16 0.00e+00 1050.00
IUUC-Ago-007821 Ashbya gossypii 32.64 5.00e-72 265.00
IUUC-Acl-008251 Aspergillus clavatus 31.39 1.00e-60 227.00
IUUC-Afl-008584 Aspergillus flavus 28.95 1.00e-45 177.00
IUUC-Afu-009095 Aspergillus fumigatus 31.62 7.00e-59 221.00
IUUC-Ani-009178 Aspergillus nidulans 30.45 1.00e-52 200.00
IUUC-Ang-009647 Aspergillus niger 31.17 4.00e-61 228.00
IUUC-Aor-010061 Aspergillus oryzae 28.78 5.00e-50 192.00
IUUC-Ate-010558 Aspergillus terreus 29.04 1.00e-51 197.00
IUUC-Ame-011880 Astyanax mexicanus 40.67 1.00e-98 353.00
IUUC-Bgr-012022 Blumeria graminis 32.37 3.00e-76 278.00
IUUC-Bta-012343 Bos taurus 42.29 2.00e-105 375.00
IUUC-Bci-013719 Botrytis cinerea 31.69 3.00e-76 279.00
IUUC-Bdi-014012 Brachypodium distachyon 72.54 0.00e+00 800.00
IUUC-Bol-015750 Brassica oleracea 94.85 0.00e+00 999.00
IUUC-Bra-017378 Brassica rapa 95.22 0.00e+00 1004.00
IUUC-Cel-018178 Caenorhabditis elegans 27.30 8.00e-33 134.00
IUUC-Cja-019645 Callithrix jacchus 42.00 3.00e-104 372.00
IUUC-Cfa-021173 Canis familiaris 41.73 8.00e-104 370.00
IUUC-Cpo-022175 Cavia porcellus 42.50 1.00e-103 370.00
IUUC-Csa-023470 Chlorocebus sabaeus 42.00 2.00e-104 372.00
IUUC-Cho-024406 Choloepus hoffmanni 39.05 4.00e-55 208.00
IUUC-Cin-025267 Ciona intestinalis 39.59 2.00e-69 255.00
IUUC-Cgl-026539 Colletotrichum gloeosporioides 34.12 3.00e-77 282.00
IUUC-Cne-026856 Cryptococcus neoformans 30.81 4.00e-65 242.00
IUUC-Cme-027272 Cyanidioschyzon merolae 27.56 3.00e-31 129.00
IUUC-Dre-027977 Danio rerio 40.04 6.00e-99 353.00
IUUC-Dno-029872 Dasypus novemcinctus 45.28 9.00e-77 280.00
IUUC-Dor-030233 Dipodomys ordii 43.81 5.00e-68 251.00
IUUC-Dse-031306 Dothistroma septosporum 30.07 2.00e-65 242.00
IUUC-Dme-031877 Drosophila melanogaster 41.20 1.00e-59 223.00
IUUC-Ete-032688 Echinops telfairi 35.91 5.00e-33 135.00
IUUC-Eca-033845 Equus caballus 41.94 1.00e-101 363.00
IUUC-Eeu-034744 Erinaceus europaeus 35.71 1.00e-21 97.40
IUUC-Fca-036291 Felis catus 41.81 2.00e-104 372.00
IUUC-Fal-036779 Ficedula albicollis 40.99 2.00e-103 369.00
IUUC-Fox-037869 Fusarium oxysporum 33.83 1.00e-73 270.00
IUUC-Fso-038267 Fusarium solani 34.38 2.00e-77 282.00
IUUC-Gmo-039534 Gadus morhua 39.70 4.00e-100 358.00
IUUC-Ggr-039826 Gaeumannomyces graminis 34.38 3.00e-61 229.00
IUUC-Gga-040228 Gallus gallus 40.99 7.00e-103 367.00
IUUC-Gac-041593 Gasterosteus aculeatus 40.00 2.00e-99 355.00
IUUC-Gma-043291 Glycine max 80.71 0.00e+00 880.00
IUUC-Ggo-044491 Gorilla gorilla 42.00 2.00e-104 372.00
IUUC-Hsa-046186 Homo sapiens 42.08 1.00e-105 376.00
IUUC-Hvu-047156 Hordeum vulgare 71.38 2.00e-110 391.00
IUUC-Itr-048812 Ictidomys tridecemlineatus 42.26 3.00e-103 368.00
IUUC-Kpa-049186 Komagataella pastoris 33.02 1.00e-71 263.00
IUUC-Lch-050215 Latimeria chalumnae 42.93 7.00e-86 310.00
IUUC-Lpe-051395 Leersia perrieri 67.49 0.00e+00 697.00
IUUC-Loc-052340 Lepisosteus oculatus 39.36 3.00e-93 335.00
IUUC-Lma-053003 Leptosphaeria maculans 32.54 4.00e-73 268.00
IUUC-Laf-054125 Loxodonta africana 41.31 8.00e-97 347.00
IUUC-Mcc-054598 Macaca mulatta 42.00 1.00e-104 372.00
IUUC-Meu-056839 Macropus eugenii 34.33 2.00e-60 226.00
IUUC-Mor-056916 Magnaporthe oryzae 34.05 8.00e-64 237.00
IUUC-Mtr-057912 Medicago truncatula 76.88 0.00e+00 833.00
IUUC-Mla-058971 Melampsora laricipopulina 27.80 1.00e-58 221.00
IUUC-Mga-059655 Meleagris gallopavo 41.49 1.00e-100 360.00
IUUC-Mvi-060246 Microbotryum violaceum 29.61 5.00e-67 248.00
IUUC-Mmr-060691 Microcebus murinus 42.37 2.00e-104 372.00
IUUC-Mdo-061872 Monodelphis domestica 41.81 4.00e-105 375.00
IUUC-Mmu-063256 Mus musculus 42.00 3.00e-104 372.00
IUUC-Mac-064797 Musa acuminata 73.75 0.00e+00 799.00
IUUC-Mpu-066773 Mustela putorius furo 42.14 2.00e-101 362.00
IUUC-Mlu-067237 Myotis lucifugus 41.81 2.00e-103 369.00
IUUC-Nfi-068499 Neosartorya fischeri 30.24 8.00e-57 214.00
IUUC-Ncr-068893 Neurospora crassa 31.35 3.00e-73 269.00
IUUC-Nle-070117 Nomascus leucogenys 41.81 7.00e-104 370.00
IUUC-Opr-070994 Ochotona princeps 47.68 8.00e-60 224.00
IUUC-Ont-072034 Oreochromis niloticus 39.55 8.00e-100 357.00
IUUC-Oan-072989 Ornithorhynchus anatinus 47.80 9.00e-52 196.00
IUUC-Ocu-074107 Oryctolagus cuniculus 39.42 2.00e-88 319.00
IUUC-Oba-074985 Oryza barthii 72.47 0.00e+00 766.00
IUUC-Obr-076412 Oryza brachyantha 72.75 0.00e+00 750.00
IUUC-Ogl-077693 Oryza glaberrima 72.66 0.00e+00 768.00
IUUC-Ogu-078411 Oryza glumaepatula 72.38 0.00e+00 768.00
IUUC-Oin-079841 Oryza indica 72.55 0.00e+00 729.00
IUUC-Olo-080560 Oryza longistaminata 69.94 0.00e+00 723.00
IUUC-Ome-081660 Oryza meridionalis 72.57 0.00e+00 769.00
IUUC-Oni-082141 Oryza nivara 72.47 0.00e+00 765.00
IUUC-Opu-083634 Oryza punctata 72.47 0.00e+00 763.00
IUUC-Oru-084291 Oryza rufipogon 72.47 0.00e+00 765.00
IUUC-Osa-085547 Oryza sativa 72.57 0.00e+00 770.00
IUUC-Ola-086854 Oryzias latipes 39.51 2.00e-101 362.00
IUUC-Olu-087784 Ostreococcus lucimarinus 41.65 3.00e-86 312.00
IUUC-Oga-088800 Otolemur garnettii 42.08 5.00e-92 331.00
IUUC-Oar-089669 Ovis aries 42.61 7.00e-102 363.00
IUUC-Ptr-091251 Pan troglodytes 42.00 2.00e-104 372.00
IUUC-Pan-092320 Papio anubis 40.87 7.00e-98 350.00
IUUC-Psi-093847 Pelodiscus sinensis 40.99 4.00e-104 371.00
IUUC-Pno-094804 Phaeosphaeria nodorum 32.29 2.00e-76 279.00
IUUC-Ppa-095889 Physcomitrella patens 59.40 6.00e-178 616.00
IUUC-Pfo-096273 Poecilia formosa 40.68 1.00e-101 363.00
IUUC-Pab-098108 Pongo abelii 48.29 1.00e-69 256.00
IUUC-Pop-099818 Populus trichocarpa 82.17 0.00e+00 907.00
IUUC-Pca-100859 Procavia capensis 41.58 2.00e-40 159.00
IUUC-Pva-102413 Pteropus vampyrus 42.00 1.00e-104 373.00
IUUC-Pgr-103689 Puccinia graminis 31.89 4.00e-45 175.00
IUUC-Ptt-103799 Puccinia triticina 29.78 6.00e-38 151.00
IUUC-Pte-104162 Pyrenophora teres 31.54 1.00e-68 253.00
IUUC-Pyt-104476 Pyrenophora triticirepentis 32.08 1.00e-71 263.00
IUUC-Rno-105403 Rattus norvegicus 42.37 3.00e-103 368.00
IUUC-Sce-106205 Saccharomyces cerevisiae 31.73 7.00e-76 278.00
IUUC-Sha-107183 Sarcophilus harrisii 41.62 2.00e-105 376.00
IUUC-Sja-107827 Schizosaccharomyces japonicus 34.38 2.00e-84 306.00
IUUC-Spo-108188 Schizosaccharomyces pombe 35.38 1.00e-81 296.00
IUUC-Ssl-108522 Sclerotinia sclerotiorum 39.83 2.00e-47 181.00
IUUC-Smo-109302 Selaginella moellendorffii 54.44 2.00e-153 534.00
IUUC-Sit-110486 Setaria italica 71.96 0.00e+00 750.00
IUUC-Sly-111083 Solanum lycopersicum 80.85 0.00e+00 910.00
IUUC-Sar-113712 Sorex araneus 43.77 7.00e-70 257.00
IUUC-Sbi-114145 Sorghum bicolor 72.80 0.00e+00 748.00
IUUC-Sre-115016 Sporisorium reilianum 31.28 5.00e-54 206.00
IUUC-Ssc-115757 Sus scrofa 42.25 9.00e-102 363.00
IUUC-Tgu-116718 Taeniopygia guttata 40.99 1.00e-103 369.00
IUUC-Tru-118018 Takifugu rubripes 39.92 9.00e-101 360.00
IUUC-Tsy-118804 Tarsius syrichta 41.96 3.00e-90 325.00
IUUC-Tni-119767 Tetraodon nigroviridis 39.81 1.00e-98 353.00
IUUC-Tca-121364 Theobroma cacao 83.49 0.00e+00 910.00
IUUC-Tre-122067 Trichoderma reesei 33.70 2.00e-78 286.00
IUUC-Tvi-122461 Trichoderma virens 33.58 1.00e-76 280.00
IUUC-Tae-123368 Triticum aestivum 71.16 0.00e+00 776.00
IUUC-Tur-126602 Triticum urartu 73.11 2.00e-165 574.00
IUUC-Tme-126892 Tuber melanosporum 32.97 3.00e-75 275.00
IUUC-Tbe-127430 Tupaia belangeri 39.43 4.00e-26 112.00
IUUC-Ttr-128535 Tursiops truncatus 42.18 1.00e-103 369.00
IUUC-Uma-129584 Ustilago maydis 30.55 3.00e-56 213.00
IUUC-Vda-129823 Verticillium dahliae 35.50 8.00e-83 300.00
IUUC-Vpa-130167 Vicugna pacos 40.79 4.00e-78 285.00
IUUC-Vvi-131646 Vitis vinifera 82.87 0.00e+00 909.00
IUUC-Xtr-131785 Xenopus tropicalis 47.91 7.00e-70 256.00
IUUC-Xma-133644 Xiphophorus maculatus 40.87 3.00e-102 365.00
IUUC-Yli-134405 Yarrowia lipolytica 31.28 5.00e-78 285.00
IUUC-Zma-135969 Zea mays 70.92 0.00e+00 738.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved