iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d051829	Zm00001d051829_T001	Zm00001d051829_T001
Zm00001d051829	Zm00001d051829_T002	Zm00001d051829_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-26	93.4	22	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           e+f+Cp+++++M+dPv++++G+t++r++I kw+++++      tcP+t+++l+++d++P+++lr++iq+w+++n+
   Q: 22   EAFMCPLTKQVMHDPVTIETGQTFEREAILKWFRECRDsgrkpTCPLTQAELRSTDITPSIALRNVIQEWRARNE 96
           89*******************************555555556******************************997 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MEGFCGGDSE LDEQSNQEPA FEAFMCPLTK QVMHDPVTIE TGQTFEREAI LKWFRECRDS 60
GRKPTCPLTQ AELRSTDITP SIALRNVIQE WRARNEDKEL DKAMASLTAT QEAQAQDDDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCGAGTA GTCGCCTCGT CTTCTATCGG CCCCCAAGGT GGGTGATTGG TGGTTCGTTT 60
GACATGTCCC TTTTGTAACT AGTAAGTAAT AAAGCAATAA TTGCTGCTGT GCTAGGCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR021133--HEAT_type_2
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50077--HEAT_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

zma:100502487

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014702	Brachypodium distachyon	73.46	0.00e+00	1086.00
IUUC-Hvu-047350	Hordeum vulgare	74.04	0.00e+00	1084.00
IUUC-Lch-049643	Latimeria chalumnae	31.25	8.00e-08	51.20
IUUC-Lpe-051625	Leersia perrieri	67.91	0.00e+00	997.00
IUUC-Oba-075990	Oryza barthii	63.51	0.00e+00	959.00
IUUC-Obr-076196	Oryza brachyantha	67.22	0.00e+00	805.00
IUUC-Ogl-077850	Oryza glaberrima	66.67	0.00e+00	1006.00
IUUC-Ogu-078913	Oryza glumaepatula	64.58	0.00e+00	988.00
IUUC-Oin-079057	Oryza indica	66.71	0.00e+00	1007.00
IUUC-Olo-080644	Oryza longistaminata	50.61	0.00e+00	707.00
IUUC-Ome-081744	Oryza meridionalis	66.28	0.00e+00	1006.00
IUUC-Oni-082927	Oryza nivara	64.58	0.00e+00	988.00
IUUC-Opu-083417	Oryza punctata	67.47	0.00e+00	999.00
IUUC-Oru-085059	Oryza rufipogon	64.58	0.00e+00	988.00
IUUC-Osa-085409	Oryza sativa	66.71	0.00e+00	1007.00
IUUC-Sit-110197	Setaria italica	81.93	0.00e+00	1233.00
IUUC-Sbi-113974	Sorghum bicolor	89.06	0.00e+00	1364.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence