iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-134708

Ensembl Protein ID

Zm00001d052590_T001

UniProt Accession

A0A1D6QHX8; A0A1D6QHX8_MAIZE

Genbank Protein ID

AQK57469.1

Protein Name

SWI/SNF complex subunit SWI3C

Genbank Nucleotide ID

CM000780

Gene Name

ZEAMMB73_Zm00001d052590

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d052590	Zm00001d052590_T001	Zm00001d052590_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-06	28.6	111	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd..tllvsGsdDgtikvWDlrtgvllk 37
           + +af sd   +++sGsdDg   +W+ rtg+l+k
   Q: 111  CIVAFySDvgEFIASGSDDGRWFIWEKRTGRLTK 144
           447999888899******************9987 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSPVNFKRVE ITEDAKPDWT DKETLHLLEA VLHYGEDWKK VSEHVSSRSE KDCIARFIRL 60
PFGEQFMGHK EDRMRFENTD DNTDEPGANV SKRPRLTPLA DASNPIMAQV CIVAFYSDVG 120

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Nucleotide Sequence
(Fasta)

ATGTCTCCTG TTAACTTCAA GAGAGTTGAA ATTACTGAAG ATGCAAAACC AGATTGGACA 60
GACAAAGAAA CTCTTCACTT GCTTGAGGCT GTCTTGCATT ATGGGGAAGA CTGGAAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR009057--Homeobox-like
IPR001005--SANT/Myb
IPR017884--SANT_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS51293--SANT
PS50294--WD_REPEATS_REGION

Pfam

PF00249--Myb_DNA-binding

SMART

SM00717--SANT
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence