iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-25	89.0	270	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt++v +la+sd +ll+s+s D+t+++W++ ++ +l+
   Q: 270  GHTGDVLDLAWSDsNLLLSASKDKTVRLWRTGCDQCLH 307
           8**********777****************99988876 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MMSVGRSEVV VDDLFFDSSD VLSIGEQVVV EEEEVEEAEF QVWSGEPISV EERRVRFLKK 60
MGLLEERCLE RMVSDYSDEV TSSSSDSSLC DSGLQCCVRE ENYGSTTSIS DEELEGVDDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGTCAAGA TTACTGGTTC GTGTTCTTAC ACATATATTG TACTATAGTT TGCATAGTTA 60
CTCAGATTCT TGTTTTTTTC GTTTCAATAT ACAGATGATT GTATAAAATG ATGCTTTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR000009--PP2A_PR55
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT
PR00600--PP2APR55

SMART

SM00320--WD40

Gene Ontology

GO:0000159--C:protein phosphatase type 2A complex
GO:0019888--F:protein phosphatase regulator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006003	Arabidopsis lyrata	79.89	0.00e+00	803.00
IUUC-Bol-016429	Brassica oleracea	65.82	0.00e+00	657.00
IUUC-Bra-017701	Brassica rapa	65.29	0.00e+00	659.00
IUUC-Gma-043873	Glycine max	43.71	5.00e-102	364.00
IUUC-Mtr-057957	Medicago truncatula	42.83	4.00e-99	355.00
IUUC-Stu-112569	Solanum tuberosum	43.07	5.00e-104	371.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence