iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_201000003	fgenesh1_pg.C_scaffold_201000003	fgenesh1_pg.C_scaffold_201000003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E1	4.30e-86	290.4	225	488

Active Site

Position(s)	Description	Evidence
406	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU10132}

Domain Profile

   S: 1    YDRQirlwGeeaqeklksakvllvGagglGcEllKnLvlaGv.....gsitvvDmdtvevsnlnrqFLfraedvgks 72
           YD Qi ++G++ q+kl+ akv+ vG g+lGcE+lKn++l+Gv     g++tv+D+d +e+snl+rqFLfr++++g+ 
   Q: 225  YDAQISVFGAKFQKKLEDAKVFTVGSGALGCEFLKNMALMGVscgsqGKLTVTDDDIIEKSNLSRQFLFRDWNIGQA 301
           ***************************************************************************** PP
   S: 73   KAevaaealkelnpdvnveaheesiteleeeiv...FfkkfdvVvlaldnrearrkvnrlclnarvpliesgtlGll 146
           K+ vaa a++ +np  n+ea ++++ +++e+++   F ++++vVv+aldn+ ar++v+++cl+ ++pl+esgtlG +
   Q: 302  KSTVAASAAAAINPRFNIEALQNRVGAETENVFddaFWENLTVVVNALDNVNARLYVDSRCLYFQKPLLESGTLGAK 378
           *******************************99******************************************** PP
   S: 147  GqvrviikgltecyscsddppqktiPfctlketpnaaehtiewa............vlfnklleeeageeevlekld 211
            +++ +i++lte y +s+dpp+k++P+ct+ ++p +++h+++wa            + +n +l+   + ++      
   Q: 379  CNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWArsefegllektpAEVNAYLSSPVEYTNSMMSAG 455
           *********************************************99999999888777777777777777777778 PP
   S: 212  seekeegkdkvkselksedeenfeeaieiavka 244
            ++ +++++++ + l +e+ e+f+++ ++a+  
   Q: 456  DAQARDTLERILECLDKEKCETFQDCLTWARLR 488
           88999999999999999************9865 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGISHVLSRF FHHFMLHKRA SEANDKNDNS IIGSDLASSK KRRIDITDSS SSDNKSSIVA 60
SGSSSSSSGF HGDSVAHQID MAFGNSNRQE IDEDLHSRQL AVYGRETMRR LFASNVLISG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAATTT CTCATGTTTT GTCCAGGTTT TTTCATCACT TTATGCTTCA CAAGCGAGCT 60
AGTGAAGCTA ACGATAAGAA CGATAATAGC ATCATCGGTT CCGATTTAGC ATCATCTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016040--NAD(P)-bd_dom
IPR000594--ThiF_NAD_FAD-bd
IPR019572--UBA_E1_Cys
IPR018074--UBQ-activ_enz_E1_CS
IPR033127--UBQ-activ_enz_E1_Cys_AS

PROSITE

PS00536--UBIQUITIN_ACTIVAT_1
PS00865--UBIQUITIN_ACTIVAT_2

Pfam

PF00899--ThiF
PF10585--UBA_e1_thiolCys

Gene Ontology

GO:0016881--F:acid-amino acid ligase activity
GO:0008641--F:small protein activating enzyme activity

KEGG

aly:ARALYDRAFT_359413

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence