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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007002
UUCD1 version UUC-ArT-00340
Ensembl Protein ID AT4G17905.2
UniProt Accession P0C041; O49690; ATL53_ARATH
Genbank Protein ID CAA17134.1; CAB78793.1; AEE83966.1
Protein Name Putative RING-H2 finger protein ATL53; RING-type E3 ubiquitin transferase ATL53
Genbank Nucleotide ID AL021889; AL161547; CP002687
Gene Name ATL53; At4g17905; T6K21.90
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G17905 AT4G17905.2 AT4G17905.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 2.40e-08 35.2 181 223
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl +f  ++ +++lp C+H+fh  C+ +w       + + +CPlCr
   Q: 181  CSICLGEFneDESLRLLPkCNHTFHVVCIDRW------LKSHSNCPLCR 223
           ********8755699999**************......**********8 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MNTLINVTQS LINPSRILFF FCLSSFMESD PNPSAWNQYI NPRDCTQGLC STFCPQWCTY 60
INFSPPPISY EQFLNDGVAS NPNLSPLVIA IFGIFATAFL LAAYYTLVSK YCANDTTNEA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007002|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAAGTAAGGA GATAAATAAT AATCAGAGCA AATTAGCTTC TCATGTACCA GCAAGAATCT 60
CTATTATCTA TTATAAAATA TCAAGTTTTG GTACATTCCA CATCTATAAA CTACATTCAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007002|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
KEGG ath:AT4G17905
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-006548 Arabidopsis lyrata 90.21 5.00e-116 411.00
IUUC-Bol-015290 Brassica oleracea 77.78 2.00e-133 467.00
IUUC-Bra-017916 Brassica rapa 79.08 1.00e-135 475.00
IUUC-Mac-064576 Musa acuminata 47.62 8.00e-50 190.00
Created Date 25-Jun-2017

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